Protein–RNA interactions for Protein: P43558

OTU1, Ubiquitin thioesterase OTU1, yeastyeast

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
OTU1P43558 NMD2YHR077C 3270 nt2.7□□□□□ -1.98
OTU1P43558 FUN30YAL019W 3396 nt2.7□□□□□ -1.98
OTU1P43558 UBP14YBR058C 2346 nt2.69□□□□□ -1.98
OTU1P43558 YER066C-AYER066C-A 501 nt2.69□□□□□ -1.98
OTU1P43558 YGR114CYGR114C 390 nt2.69□□□□□ -1.98
OTU1P43558 PXR1YGR280C 816 nt2.69□□□□□ -1.98
OTU1P43558 YIL156W-AYIL156W-A 402 nt2.69□□□□□ -1.98
OTU1P43558 YLR297WYLR297W 390 nt2.69□□□□□ -1.98
OTU1P43558 YLR400WYLR400W 474 nt2.69□□□□□ -1.98
OTU1P43558 VMA6YLR447C 1038 nt2.69□□□□□ -1.98
OTU1P43558 RPS10AYOR293W 318 nt2.69□□□□□ -1.98
OTU1P43558 YJR061WYJR061W 2808 nt2.69□□□□□ -1.98
OTU1P43558 VPS9YML097C 1356 nt2.69□□□□□ -1.98
OTU1P43558 NSE3YDR288W 912 nt2.68□□□□□ -1.98
OTU1P43558 MRPL6YHR147C 645 nt2.68□□□□□ -1.98
OTU1P43558 YIL054WYIL054W 318 nt2.68□□□□□ -1.98
OTU1P43558 HRT3YLR097C 1035 nt2.68□□□□□ -1.98
OTU1P43558 IMP4YNL075W 873 nt2.68□□□□□ -1.98
OTU1P43558 BUD21YOR078W 645 nt2.68□□□□□ -1.98
OTU1P43558 NUF2YOL069W 1356 nt2.68□□□□□ -1.98
OTU1P43558 SPH1YLR313C 1593 nt2.68□□□□□ -1.98
OTU1P43558 VPS30YPL120W 1674 nt2.68□□□□□ -1.98
OTU1P43558 SKT5YBL061C 2091 nt2.68□□□□□ -1.98
OTU1P43558 RAX2YLR084C 3663 nt2.68□□□□□ -1.98
OTU1P43558 BEM4YPL161C 1902 nt2.68□□□□□ -1.98
OTU1P43558 CET1YPL228W 1650 nt2.67□□□□□ -1.98
OTU1P43558 UTP14YML093W 2700 nt2.67□□□□□ -1.98
OTU1P43558 HFD1YMR110C 1599 nt2.67□□□□□ -1.98
OTU1P43558 ADY4YLR227C 1482 nt2.67□□□□□ -1.98
OTU1P43558 AHP1YLR109W 531 nt2.67□□□□□ -1.98
OTU1P43558 ATG34YOL083W 1239 nt2.67□□□□□ -1.98
OTU1P43558 THI80YOR143C 960 nt2.67□□□□□ -1.98
OTU1P43558 PPT2YPL148C 522 nt2.67□□□□□ -1.98
OTU1P43558 IRC3YDR332W 2070 nt2.67□□□□□ -1.98
OTU1P43558 PAF1YBR279W 1338 nt2.67□□□□□ -1.98
OTU1P43558 JSN1YJR091C 3276 nt2.66□□□□□ -1.98
OTU1P43558 YIL082W-AYIL082W-A 4497 nt2.66□□□□□ -1.98
OTU1P43558 CWH41YGL027C 2502 nt2.66□□□□□ -1.98
OTU1P43558 PMR1YGL167C 2853 nt2.66□□□□□ -1.98
OTU1P43558 RRG1YDR065W 1098 nt2.66□□□□□ -1.98
OTU1P43558 DUO1YGL061C 744 nt2.66□□□□□ -1.98
OTU1P43558 PRP18YGR006W 756 nt2.66□□□□□ -1.98
OTU1P43558 LSM8YJR022W 330 nt2.66□□□□□ -1.98
OTU1P43558 YLR311CYLR311C 348 nt2.66□□□□□ -1.98
OTU1P43558 YNL035CYNL035C 1170 nt2.66□□□□□ -1.98
OTU1P43558 HRT1YOL133W 366 nt2.66□□□□□ -1.98
OTU1P43558 YPL107WYPL107W 747 nt2.66□□□□□ -1.98
OTU1P43558 TAO3YIL129C 7131 nt2.66□□□□□ -1.98
OTU1P43558 ATG13YPR185W 2217 nt2.66□□□□□ -1.98
OTU1P43558 AKR1YDR264C 2295 nt2.66□□□□□ -1.98
OTU1P43558 KIN3YAR018C 1308 nt2.66□□□□□ -1.98
OTU1P43558 FLO5YHR211W 3228 nt2.65□□□□□ -1.98
OTU1P43558 MDM1YML104C 3384 nt2.65□□□□□ -1.98
OTU1P43558 APA2YDR530C 978 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)DtK(UUU)D 73 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)G1tK(UUU)G1 73 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)G2tK(UUU)G2 73 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)KtK(UUU)K 73 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)LtK(UUU)L 73 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)OtK(UUU)O 73 nt2.65□□□□□ -1.99
OTU1P43558 tK(UUU)PtK(UUU)P 73 nt2.65□□□□□ -1.99
OTU1P43558 BRR6YGL247W 594 nt2.65□□□□□ -1.99
OTU1P43558 MRPL9YGR220C 810 nt2.65□□□□□ -1.99
OTU1P43558 ATP12YJL180C 978 nt2.65□□□□□ -1.99
OTU1P43558 SDH3YKL141W 597 nt2.65□□□□□ -1.99
OTU1P43558 DDI3YNL335W 678 nt2.65□□□□□ -1.99
OTU1P43558 TRM112YNR046W 408 nt2.65□□□□□ -1.99
OTU1P43558 RPA43YOR340C 981 nt2.65□□□□□ -1.99
OTU1P43558 ERG11YHR007C 1593 nt2.65□□□□□ -1.99
OTU1P43558 COM2YER130C 1332 nt2.65□□□□□ -1.99
OTU1P43558 GEA1YJR031C 4227 nt2.64□□□□□ -1.99
OTU1P43558 RPS14AYCR031C 414 nt2.64□□□□□ -1.99
OTU1P43558 YCR085WYCR085W 354 nt2.64□□□□□ -1.99
OTU1P43558 TSC13YDL015C 933 nt2.64□□□□□ -1.99
OTU1P43558 OPI6YDL096C 327 nt2.64□□□□□ -1.99
OTU1P43558 ARI1YGL157W 1044 nt2.64□□□□□ -1.99
OTU1P43558 QCR10YHR001W-A 234 nt2.64□□□□□ -1.99
OTU1P43558 INO4YOL108C 456 nt2.64□□□□□ -1.99
OTU1P43558 ATP22YDR350C 2055 nt2.64□□□□□ -1.99
OTU1P43558 CAF120YNL278W 3183 nt2.63□□□□□ -1.99
OTU1P43558 PEX6YNL329C 3093 nt2.63□□□□□ -1.99
OTU1P43558 PSP1YDR505C 2526 nt2.63□□□□□ -1.99
OTU1P43558 RPL35BYDL136W 363 nt2.63□□□□□ -1.99
OTU1P43558 HMO1YDR174W 741 nt2.63□□□□□ -1.99
OTU1P43558 YDR222WYDR222W 1248 nt2.63□□□□□ -1.99
OTU1P43558 RNH202YDR279W 1053 nt2.63□□□□□ -1.99
OTU1P43558 YDR535CYDR535C 501 nt2.63□□□□□ -1.99
OTU1P43558 CDC26YFR036W 375 nt2.63□□□□□ -1.99
OTU1P43558 YGL138CYGL138C 1038 nt2.63□□□□□ -1.99
OTU1P43558 BAT1YHR208W 1182 nt2.63□□□□□ -1.99
OTU1P43558 RPL17BYJL177W 555 nt2.63□□□□□ -1.99
OTU1P43558 ERV41YML067C 1059 nt2.63□□□□□ -1.99
OTU1P43558 MRPL33YMR286W 261 nt2.63□□□□□ -1.99
OTU1P43558 SSP2YOR242C 1116 nt2.63□□□□□ -1.99
OTU1P43558 AFT2YPL202C 1251 nt2.63□□□□□ -1.99
OTU1P43558 YDR098C-BYDR098C-B 5268 nt2.63□□□□□ -1.99
OTU1P43558 YDR210C-DYDR210C-D 5268 nt2.63□□□□□ -1.99
OTU1P43558 YDR316W-BYDR316W-B 5268 nt2.63□□□□□ -1.99
OTU1P43558 YDR365W-BYDR365W-B 5268 nt2.63□□□□□ -1.99
OTU1P43558 YER138CYER138C 5268 nt2.63□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms