Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.86■■□□□ 1.09
SLC6A4P31645 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A4P31645 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A4P31645 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A4P31645 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A4P31645 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC6A4P31645 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC6A4P31645 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
SLC6A4P31645 AL117328.2-201ENST00000624617 1940 ntBASIC21.85■■□□□ 1.09
SLC6A4P31645 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A4P31645 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
SLC6A4P31645 KRT18P11-201ENST00000435214 1283 ntBASIC21.85■■□□□ 1.09
SLC6A4P31645 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC6A4P31645 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A4P31645 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC6A4P31645 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SLC6A4P31645 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC6A4P31645 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A4P31645 MFSD11-216ENST00000590393 1141 ntBASIC21.84■■□□□ 1.09
SLC6A4P31645 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC6A4P31645 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.84■■□□□ 1.09
SLC6A4P31645 AC073111.5-205ENST00000641717 521 ntBASIC21.84■■□□□ 1.09
SLC6A4P31645 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC6A4P31645 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A4P31645 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A4P31645 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SLC6A4P31645 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A4P31645 CDCA4P2-201ENST00000441182 718 ntBASIC21.83■■□□□ 1.09
SLC6A4P31645 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.83■■□□□ 1.09
SLC6A4P31645 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A4P31645 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A4P31645 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.83■■□□□ 1.08
SLC6A4P31645 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A4P31645 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC6A4P31645 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.82■■□□□ 1.08
SLC6A4P31645 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 SLC7A5P2-201ENST00000553010 536 ntBASIC21.82■■□□□ 1.08
SLC6A4P31645 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.82■■□□□ 1.08
SLC6A4P31645 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.82■■□□□ 1.08
SLC6A4P31645 RAP2CP1-201ENST00000605103 478 ntBASIC21.82■■□□□ 1.08
SLC6A4P31645 MYCNOS-205ENST00000641950 531 ntBASIC21.82■■□□□ 1.08
SLC6A4P31645 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A4P31645 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC6A4P31645 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A4P31645 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A4P31645 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A4P31645 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC6A4P31645 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A4P31645 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A4P31645 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A4P31645 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC6A4P31645 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A4P31645 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A4P31645 EP400NL-214ENST00000641289 2402 ntBASIC21.81■■□□□ 1.08
SLC6A4P31645 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SLC6A4P31645 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC6A4P31645 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A4P31645 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SLC6A4P31645 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 KRT18P20-201ENST00000548986 1279 ntBASIC21.8■■□□□ 1.08
SLC6A4P31645 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC6A4P31645 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A4P31645 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A4P31645 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A4P31645 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A4P31645 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC6A4P31645 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms