Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.35■■□□□ 1.81
KCNA3P22001 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNA3P22001 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNA3P22001 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.35■■□□□ 1.81
KCNA3P22001 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.35■■□□□ 1.81
KCNA3P22001 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KCNA3P22001 KRT17P1-201ENST00000399211 1546 ntBASIC26.34■■□□□ 1.81
KCNA3P22001 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.34■■□□□ 1.81
KCNA3P22001 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KCNA3P22001 SNORA78-201ENST00000459373 127 ntBASIC26.34■■□□□ 1.81
KCNA3P22001 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.34■■□□□ 1.81
KCNA3P22001 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.34■■□□□ 1.81
KCNA3P22001 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.34■■□□□ 1.81
KCNA3P22001 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.34■■□□□ 1.81
KCNA3P22001 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
KCNA3P22001 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
KCNA3P22001 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.34■■□□□ 1.81
KCNA3P22001 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
KCNA3P22001 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNA3P22001 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.33■■□□□ 1.81
KCNA3P22001 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
KCNA3P22001 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
KCNA3P22001 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNA3P22001 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNA3P22001 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNA3P22001 C1QBPP2-201ENST00000528754 825 ntBASIC26.33■■□□□ 1.81
KCNA3P22001 AC120498.10-201ENST00000621827 505 ntBASIC26.33■■□□□ 1.81
KCNA3P22001 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNA3P22001 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.33■■□□□ 1.81
KCNA3P22001 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNA3P22001 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
KCNA3P22001 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
KCNA3P22001 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
KCNA3P22001 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNA3P22001 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.32■■□□□ 1.8
KCNA3P22001 LSM12P1-201ENST00000411836 588 ntBASIC26.32■■□□□ 1.8
KCNA3P22001 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 CYP2T3P-201ENST00000601990 817 ntBASIC26.32■■□□□ 1.8
KCNA3P22001 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.32■■□□□ 1.8
KCNA3P22001 AC243732.1-201ENST00000612648 864 ntBASIC26.32■■□□□ 1.8
KCNA3P22001 AC008175.2-201ENST00000612840 297 ntBASIC26.32■■□□□ 1.8
KCNA3P22001 OR7E47P-201ENST00000546390 1422 ntBASIC26.31■■□□□ 1.8
KCNA3P22001 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.31■■□□□ 1.8
KCNA3P22001 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNA3P22001 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KCNA3P22001 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNA3P22001 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNA3P22001 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KCNA3P22001 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
KCNA3P22001 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.31■■□□□ 1.8
KCNA3P22001 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
KCNA3P22001 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.31■■□□□ 1.8
KCNA3P22001 RN7SL471P-201ENST00000580476 299 ntBASIC26.31■■□□□ 1.8
KCNA3P22001 AC060766.5-201ENST00000590539 871 ntBASIC26.31■■□□□ 1.8
KCNA3P22001 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.31■■□□□ 1.8
KCNA3P22001 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNA3P22001 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KCNA3P22001 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
KCNA3P22001 POU5F1P4-201ENST00000413175 1085 ntBASIC26.3■■□□□ 1.8
KCNA3P22001 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
KCNA3P22001 AL355472.2-201ENST00000422958 438 ntBASIC26.3■■□□□ 1.8
KCNA3P22001 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.3■■□□□ 1.8
KCNA3P22001 AL034346.1-201ENST00000568244 1277 ntBASIC26.3■■□□□ 1.8
KCNA3P22001 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
KCNA3P22001 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
KCNA3P22001 FAM197Y4-202ENST00000622692 608 ntBASIC26.3■■□□□ 1.8
KCNA3P22001 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNA3P22001 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
KCNA3P22001 LINC01960-201ENST00000563759 1884 ntBASIC26.3■■□□□ 1.8
KCNA3P22001 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 ABCB10P4-201ENST00000566803 2184 ntBASIC26.29■■□□□ 1.8
KCNA3P22001 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
KCNA3P22001 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNA3P22001 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.29■■□□□ 1.8
KCNA3P22001 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
KCNA3P22001 LINC01023-201ENST00000606054 436 ntBASIC26.29■■□□□ 1.8
KCNA3P22001 HLA-B-256ENST00000639848 1089 ntBASIC26.29■■□□□ 1.8
KCNA3P22001 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
KCNA3P22001 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNA3P22001 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
KCNA3P22001 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
KCNA3P22001 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.29■■□□□ 1.8
KCNA3P22001 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.29■■□□□ 1.8
KCNA3P22001 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNA3P22001 LINC01124-201ENST00000409786 2117 ntBASIC26.28■■□□□ 1.8
KCNA3P22001 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.28■■□□□ 1.8
KCNA3P22001 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms