Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.79■■□□□ 1.08
NR1D1P20393 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.79■■□□□ 1.08
NR1D1P20393 AF131216.4-201ENST00000638924 1588 ntBASIC21.79■■□□□ 1.08
NR1D1P20393 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NR1D1P20393 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1D1P20393 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NR1D1P20393 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NR1D1P20393 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.79■■□□□ 1.08
NR1D1P20393 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.79■■□□□ 1.08
NR1D1P20393 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.79■■□□□ 1.08
NR1D1P20393 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.79■■□□□ 1.08
NR1D1P20393 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
NR1D1P20393 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NR1D1P20393 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
NR1D1P20393 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NR1D1P20393 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1D1P20393 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1D1P20393 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1D1P20393 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NR1D1P20393 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1D1P20393 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.78■■□□□ 1.08
NR1D1P20393 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NR1D1P20393 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1D1P20393 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.78■■□□□ 1.08
NR1D1P20393 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.78■■□□□ 1.08
NR1D1P20393 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.78■■□□□ 1.08
NR1D1P20393 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NR1D1P20393 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NR1D1P20393 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NR1D1P20393 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.77■■□□□ 1.08
NR1D1P20393 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.77■■□□□ 1.08
NR1D1P20393 AC009086.3-201ENST00000623486 1008 ntBASIC21.77■■□□□ 1.08
NR1D1P20393 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NR1D1P20393 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.77■■□□□ 1.08
NR1D1P20393 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
NR1D1P20393 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
NR1D1P20393 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.76■■□□□ 1.07
NR1D1P20393 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
NR1D1P20393 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
NR1D1P20393 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.76■■□□□ 1.07
NR1D1P20393 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NR1D1P20393 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.76■■□□□ 1.07
NR1D1P20393 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NR1D1P20393 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.76■■□□□ 1.07
NR1D1P20393 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NR1D1P20393 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.75■■□□□ 1.07
NR1D1P20393 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.75■■□□□ 1.07
NR1D1P20393 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NR1D1P20393 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NR1D1P20393 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.75■■□□□ 1.07
NR1D1P20393 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.75■■□□□ 1.07
NR1D1P20393 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.75■■□□□ 1.07
NR1D1P20393 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1D1P20393 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.75■■□□□ 1.07
NR1D1P20393 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1D1P20393 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.75■■□□□ 1.07
NR1D1P20393 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1D1P20393 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NR1D1P20393 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NR1D1P20393 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
NR1D1P20393 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NR1D1P20393 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NR1D1P20393 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NR1D1P20393 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 ZNRF2P3-201ENST00000424200 374 ntBASIC21.74■■□□□ 1.07
NR1D1P20393 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NR1D1P20393 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.74■■□□□ 1.07
NR1D1P20393 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NR1D1P20393 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NR1D1P20393 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.74■■□□□ 1.07
NR1D1P20393 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.74■■□□□ 1.07
NR1D1P20393 FP325331.1-202ENST00000623531 1380 ntBASIC21.74■■□□□ 1.07
NR1D1P20393 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NR1D1P20393 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms