Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC1P18887 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC1P18887 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
XRCC1P18887 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC1P18887 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC1P18887 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
XRCC1P18887 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.11■□□□□ 0.97
XRCC1P18887 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.11■□□□□ 0.97
XRCC1P18887 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.11■□□□□ 0.97
XRCC1P18887 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
XRCC1P18887 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
XRCC1P18887 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
XRCC1P18887 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
XRCC1P18887 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XRCC1P18887 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.1■□□□□ 0.97
XRCC1P18887 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
XRCC1P18887 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
XRCC1P18887 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
XRCC1P18887 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
XRCC1P18887 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.1■□□□□ 0.97
XRCC1P18887 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.1■□□□□ 0.97
XRCC1P18887 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
XRCC1P18887 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.1■□□□□ 0.97
XRCC1P18887 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XRCC1P18887 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC1P18887 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC1P18887 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.09■□□□□ 0.97
XRCC1P18887 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.09■□□□□ 0.97
XRCC1P18887 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.09■□□□□ 0.97
XRCC1P18887 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC1P18887 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.09■□□□□ 0.97
XRCC1P18887 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
XRCC1P18887 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC1P18887 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC1P18887 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
XRCC1P18887 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XRCC1P18887 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.08■□□□□ 0.97
XRCC1P18887 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.08■□□□□ 0.97
XRCC1P18887 AC010542.4-201ENST00000563151 1910 ntBASIC21.08■□□□□ 0.97
XRCC1P18887 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
XRCC1P18887 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.08■□□□□ 0.97
XRCC1P18887 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.08■□□□□ 0.97
XRCC1P18887 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.08■□□□□ 0.97
XRCC1P18887 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
XRCC1P18887 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
XRCC1P18887 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
XRCC1P18887 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
XRCC1P18887 AC073130.3-201ENST00000624389 2278 ntBASIC21.07■□□□□ 0.96
XRCC1P18887 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 PKD1P6-201ENST00000343738 4769 ntBASIC21.07■□□□□ 0.96
XRCC1P18887 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
XRCC1P18887 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 NTF6G-201ENST00000591094 616 ntBASIC21.07■□□□□ 0.96
XRCC1P18887 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
XRCC1P18887 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XRCC1P18887 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.07■□□□□ 0.96
XRCC1P18887 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
XRCC1P18887 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.06■□□□□ 0.96
XRCC1P18887 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
XRCC1P18887 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.06■□□□□ 0.96
XRCC1P18887 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.06■□□□□ 0.96
XRCC1P18887 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
XRCC1P18887 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 AC005229.4-201ENST00000610085 2198 ntBASIC21.06■□□□□ 0.96
XRCC1P18887 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XRCC1P18887 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC1P18887 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.05■□□□□ 0.96
XRCC1P18887 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC1P18887 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
XRCC1P18887 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
XRCC1P18887 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC1P18887 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
XRCC1P18887 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.05■□□□□ 0.96
XRCC1P18887 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC1P18887 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC1P18887 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XRCC1P18887 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
XRCC1P18887 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC1P18887 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.04■□□□□ 0.96
XRCC1P18887 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC1P18887 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
XRCC1P18887 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XRCC1P18887 AC022517.1-201ENST00000592429 346 ntBASIC21.04■□□□□ 0.96
XRCC1P18887 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms