Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBPP18428 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBPP18428 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBPP18428 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LBPP18428 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LBPP18428 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.45■□□□□ 0.86
LBPP18428 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LBPP18428 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.44■□□□□ 0.86
LBPP18428 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 GUSBP5-201ENST00000418136 578 ntBASIC20.44■□□□□ 0.86
LBPP18428 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.44■□□□□ 0.86
LBPP18428 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.44■□□□□ 0.86
LBPP18428 AL512631.2-201ENST00000604634 923 ntBASIC20.44■□□□□ 0.86
LBPP18428 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.44■□□□□ 0.86
LBPP18428 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
LBPP18428 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
LBPP18428 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LBPP18428 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.43■□□□□ 0.86
LBPP18428 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
LBPP18428 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 AL138724.1-201ENST00000606771 1088 ntBASIC20.43■□□□□ 0.86
LBPP18428 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LBPP18428 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.43■□□□□ 0.86
LBPP18428 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LBPP18428 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LBPP18428 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.42■□□□□ 0.86
LBPP18428 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LBPP18428 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LBPP18428 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.41■□□□□ 0.86
LBPP18428 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.41■□□□□ 0.86
LBPP18428 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
LBPP18428 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.41■□□□□ 0.86
LBPP18428 AP005435.1-201ENST00000529293 1178 ntBASIC20.41■□□□□ 0.86
LBPP18428 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.41■□□□□ 0.86
LBPP18428 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.41■□□□□ 0.86
LBPP18428 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LBPP18428 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.41■□□□□ 0.86
LBPP18428 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LBPP18428 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LBPP18428 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LBPP18428 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LBPP18428 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LBPP18428 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.4■□□□□ 0.86
LBPP18428 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.4■□□□□ 0.86
LBPP18428 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.4■□□□□ 0.86
LBPP18428 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LBPP18428 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
LBPP18428 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 SERBP1P1-201ENST00000396021 1160 ntBASIC20.4■□□□□ 0.86
LBPP18428 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LBPP18428 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 SYT6-210ENST00000641643 1587 ntBASIC20.4■□□□□ 0.86
LBPP18428 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LBPP18428 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.39■□□□□ 0.86
LBPP18428 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LBPP18428 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LBPP18428 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LBPP18428 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LBPP18428 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LBPP18428 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LBPP18428 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LBPP18428 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LBPP18428 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LBPP18428 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.39■□□□□ 0.85
LBPP18428 DUX4L19-201ENST00000557448 1267 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms