Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
HLA-DOBP13765 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DOBP13765 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HLA-DOBP13765 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DOBP13765 AL354811.1-201ENST00000610286 706 ntBASIC19■□□□□ 0.63
HLA-DOBP13765 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HLA-DOBP13765 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DOBP13765 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HLA-DOBP13765 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DOBP13765 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DOBP13765 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.99■□□□□ 0.63
HLA-DOBP13765 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DOBP13765 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 AL358852.1-201ENST00000623174 1268 ntBASIC18.99■□□□□ 0.63
HLA-DOBP13765 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DOBP13765 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DOBP13765 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DOBP13765 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DOBP13765 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DOBP13765 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DOBP13765 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DOBP13765 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DOBP13765 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DOBP13765 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DOBP13765 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 TPRG1LP1-201ENST00000598702 760 ntBASIC18.97■□□□□ 0.63
HLA-DOBP13765 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DOBP13765 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DOBP13765 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOBP13765 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 AC005229.4-201ENST00000610085 2198 ntBASIC18.96■□□□□ 0.63
HLA-DOBP13765 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 ZNRF2P3-201ENST00000424200 374 ntBASIC18.96■□□□□ 0.63
HLA-DOBP13765 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 AF106564.1-201ENST00000607058 2553 ntBASIC18.96■□□□□ 0.63
HLA-DOBP13765 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DOBP13765 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOBP13765 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DOBP13765 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DOBP13765 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HLA-DOBP13765 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DOBP13765 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DOBP13765 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOBP13765 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms