Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCL4P13236 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCL4P13236 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCL4P13236 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.13■□□□□ 0.81
CCL4P13236 AL512625.2-201ENST00000417533 625 ntBASIC20.13■□□□□ 0.81
CCL4P13236 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCL4P13236 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCL4P13236 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.13■□□□□ 0.81
CCL4P13236 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.13■□□□□ 0.81
CCL4P13236 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCL4P13236 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.13■□□□□ 0.81
CCL4P13236 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCL4P13236 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCL4P13236 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.12■□□□□ 0.81
CCL4P13236 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCL4P13236 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL4P13236 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCL4P13236 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCL4P13236 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL4P13236 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCL4P13236 BX276092.2-201ENST00000417668 665 ntBASIC20.12■□□□□ 0.81
CCL4P13236 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.12■□□□□ 0.81
CCL4P13236 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.12■□□□□ 0.81
CCL4P13236 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.12■□□□□ 0.81
CCL4P13236 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCL4P13236 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL4P13236 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CCL4P13236 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL4P13236 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
CCL4P13236 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCL4P13236 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.11■□□□□ 0.81
CCL4P13236 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CCL4P13236 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.11■□□□□ 0.81
CCL4P13236 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CCL4P13236 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CCL4P13236 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.11■□□□□ 0.81
CCL4P13236 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.11■□□□□ 0.81
CCL4P13236 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL4P13236 RBM17P2-201ENST00000616397 1405 ntBASIC20.1■□□□□ 0.81
CCL4P13236 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCL4P13236 AC061975.6-201ENST00000579045 1553 ntBASIC20.1■□□□□ 0.81
CCL4P13236 POU5F1P3-201ENST00000428824 1078 ntBASIC20.1■□□□□ 0.81
CCL4P13236 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.1■□□□□ 0.81
CCL4P13236 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.1■□□□□ 0.81
CCL4P13236 AC092118.2-201ENST00000613495 667 ntBASIC20.1■□□□□ 0.81
CCL4P13236 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.1■□□□□ 0.81
CCL4P13236 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCL4P13236 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCL4P13236 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.09■□□□□ 0.81
CCL4P13236 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.09■□□□□ 0.81
CCL4P13236 AC008687.6-201ENST00000596318 630 ntBASIC20.09■□□□□ 0.81
CCL4P13236 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.09■□□□□ 0.81
CCL4P13236 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 KRT16P2-201ENST00000414673 1423 ntBASIC20.09■□□□□ 0.81
CCL4P13236 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL4P13236 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCL4P13236 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCL4P13236 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCL4P13236 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCL4P13236 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CCL4P13236 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.08■□□□□ 0.81
CCL4P13236 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCL4P13236 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.08■□□□□ 0.81
CCL4P13236 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CCL4P13236 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCL4P13236 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.08■□□□□ 0.8
CCL4P13236 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCL4P13236 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCL4P13236 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCL4P13236 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.08■□□□□ 0.8
CCL4P13236 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCL4P13236 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCL4P13236 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL4P13236 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL4P13236 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL4P13236 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.07■□□□□ 0.8
CCL4P13236 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.07■□□□□ 0.8
CCL4P13236 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.07■□□□□ 0.8
CCL4P13236 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.07■□□□□ 0.8
CCL4P13236 AL591742.1-201ENST00000604433 565 ntBASIC20.07■□□□□ 0.8
CCL4P13236 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms