Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.3■■■□□ 2.12
CSB-PGBD3P0DP91 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 RBM17P2-201ENST00000616397 1405 ntBASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 MMAB-206ENST00000540016 945 ntTSL 3 BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.29■■■□□ 2.12
CSB-PGBD3P0DP91 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 AC128676.1-201ENST00000454392 318 ntBASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 OR2A1-AS1-201ENST00000462305 773 ntBASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 AC142381.4-202ENST00000563973 229 ntBASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 INO80E-214ENST00000620599 515 ntTSL 2 BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
CSB-PGBD3P0DP91 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC28.27■■■□□ 2.12
CSB-PGBD3P0DP91 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CSB-PGBD3P0DP91 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC28.27■■■□□ 2.12
CSB-PGBD3P0DP91 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CSB-PGBD3P0DP91 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC28.27■■■□□ 2.12
CSB-PGBD3P0DP91 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CSB-PGBD3P0DP91 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CSB-PGBD3P0DP91 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC28.26■■■□□ 2.11
CSB-PGBD3P0DP91 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC28.26■■■□□ 2.11
CSB-PGBD3P0DP91 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.26■■■□□ 2.11
CSB-PGBD3P0DP91 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSB-PGBD3P0DP91 KRT16P2-201ENST00000414673 1423 ntBASIC28.26■■■□□ 2.11
CSB-PGBD3P0DP91 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 SERPINH1P1-201ENST00000419794 1249 ntBASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 AL162412.1-201ENST00000567129 965 ntBASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC28.25■■■□□ 2.11
CSB-PGBD3P0DP91 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC28.24■■■□□ 2.11
CSB-PGBD3P0DP91 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CSB-PGBD3P0DP91 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CSB-PGBD3P0DP91 BAALC-201ENST00000297574 801 ntTSL 3 BASIC28.23■■■□□ 2.11
CSB-PGBD3P0DP91 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC28.23■■■□□ 2.11
CSB-PGBD3P0DP91 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CSB-PGBD3P0DP91 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CSB-PGBD3P0DP91 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CSB-PGBD3P0DP91 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 AL596275.1-201ENST00000423464 877 ntBASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 RPS2P4-201ENST00000476944 856 ntBASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms