Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COL4A2P08572 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL4A2P08572 AC097658.1-201ENST00000475555 843 ntBASIC21.63■■□□□ 1.05
COL4A2P08572 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.63■■□□□ 1.05
COL4A2P08572 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.63■■□□□ 1.05
COL4A2P08572 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL4A2P08572 AC008694.1-202ENST00000636953 945 ntBASIC21.63■■□□□ 1.05
COL4A2P08572 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL4A2P08572 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL4A2P08572 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL4A2P08572 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL4A2P08572 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.62■■□□□ 1.05
COL4A2P08572 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.62■■□□□ 1.05
COL4A2P08572 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.62■■□□□ 1.05
COL4A2P08572 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
COL4A2P08572 AC006058.3-201ENST00000606217 1069 ntBASIC21.62■■□□□ 1.05
COL4A2P08572 AC120498.10-201ENST00000621827 505 ntBASIC21.62■■□□□ 1.05
COL4A2P08572 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.62■■□□□ 1.05
COL4A2P08572 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL4A2P08572 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
COL4A2P08572 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.61■■□□□ 1.05
COL4A2P08572 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.61■■□□□ 1.05
COL4A2P08572 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 AP003097.1-201ENST00000530657 1135 ntBASIC21.61■■□□□ 1.05
COL4A2P08572 AC061975.6-201ENST00000579045 1553 ntBASIC21.61■■□□□ 1.05
COL4A2P08572 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL4A2P08572 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL4A2P08572 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.6■■□□□ 1.05
COL4A2P08572 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
COL4A2P08572 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.6■■□□□ 1.05
COL4A2P08572 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.6■■□□□ 1.05
COL4A2P08572 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.6■■□□□ 1.05
COL4A2P08572 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
COL4A2P08572 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.6■■□□□ 1.05
COL4A2P08572 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL4A2P08572 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.6■■□□□ 1.05
COL4A2P08572 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.6■■□□□ 1.05
COL4A2P08572 AC008403.3-201ENST00000598924 454 ntBASIC21.6■■□□□ 1.05
COL4A2P08572 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL4A2P08572 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
COL4A2P08572 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.59■■□□□ 1.05
COL4A2P08572 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 ESRRAP1-201ENST00000400596 1257 ntBASIC21.59■■□□□ 1.05
COL4A2P08572 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.59■■□□□ 1.05
COL4A2P08572 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.59■■□□□ 1.05
COL4A2P08572 AC142381.4-202ENST00000563973 229 ntBASIC21.59■■□□□ 1.05
COL4A2P08572 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.59■■□□□ 1.05
COL4A2P08572 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL4A2P08572 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
COL4A2P08572 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL4A2P08572 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A2P08572 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A2P08572 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A2P08572 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A2P08572 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
COL4A2P08572 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A2P08572 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A2P08572 AC139530.1-201ENST00000575312 1977 ntBASIC21.58■■□□□ 1.05
COL4A2P08572 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A2P08572 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.58■■□□□ 1.05
COL4A2P08572 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL4A2P08572 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
COL4A2P08572 KRT17P1-201ENST00000399211 1546 ntBASIC21.58■■□□□ 1.05
COL4A2P08572 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A2P08572 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A2P08572 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A2P08572 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL4A2P08572 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.58■■□□□ 1.04
COL4A2P08572 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
COL4A2P08572 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.58■■□□□ 1.04
COL4A2P08572 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
COL4A2P08572 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A2P08572 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
COL4A2P08572 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL4A2P08572 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.57■■□□□ 1.04
COL4A2P08572 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL4A2P08572 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms