Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
APOA4P06727 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APOA4P06727 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APOA4P06727 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
APOA4P06727 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.22■□□□□ 0.99
APOA4P06727 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.22■□□□□ 0.99
APOA4P06727 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
APOA4P06727 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.22■□□□□ 0.99
APOA4P06727 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APOA4P06727 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
APOA4P06727 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
APOA4P06727 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
APOA4P06727 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 FEM1AP4-201ENST00000443167 1987 ntBASIC21.21■□□□□ 0.99
APOA4P06727 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.21■□□□□ 0.99
APOA4P06727 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOA4P06727 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.21■□□□□ 0.99
APOA4P06727 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
APOA4P06727 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
APOA4P06727 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
APOA4P06727 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APOA4P06727 MIR572-201ENST00000384983 95 ntBASIC21.2■□□□□ 0.98
APOA4P06727 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.2■□□□□ 0.98
APOA4P06727 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.2■□□□□ 0.98
APOA4P06727 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
APOA4P06727 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.2■□□□□ 0.98
APOA4P06727 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.2■□□□□ 0.98
APOA4P06727 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
APOA4P06727 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
APOA4P06727 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.2■□□□□ 0.98
APOA4P06727 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
APOA4P06727 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.2■□□□□ 0.98
APOA4P06727 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APOA4P06727 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APOA4P06727 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APOA4P06727 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APOA4P06727 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APOA4P06727 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
APOA4P06727 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APOA4P06727 AC105265.2-201ENST00000467189 838 ntBASIC21.19■□□□□ 0.98
APOA4P06727 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.19■□□□□ 0.98
APOA4P06727 AL034346.1-201ENST00000568244 1277 ntBASIC21.19■□□□□ 0.98
APOA4P06727 AC105233.4-201ENST00000642045 216 ntBASIC21.19■□□□□ 0.98
APOA4P06727 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APOA4P06727 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.19■□□□□ 0.98
APOA4P06727 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APOA4P06727 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.18■□□□□ 0.98
APOA4P06727 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.18■□□□□ 0.98
APOA4P06727 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
APOA4P06727 SMUG1P1-201ENST00000590640 811 ntBASIC21.18■□□□□ 0.98
APOA4P06727 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.18■□□□□ 0.98
APOA4P06727 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.18■□□□□ 0.98
APOA4P06727 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
APOA4P06727 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.18■□□□□ 0.98
APOA4P06727 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
APOA4P06727 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOA4P06727 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
APOA4P06727 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.17■□□□□ 0.98
APOA4P06727 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.17■□□□□ 0.98
APOA4P06727 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.17■□□□□ 0.98
APOA4P06727 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
APOA4P06727 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
APOA4P06727 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APOA4P06727 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.17■□□□□ 0.98
APOA4P06727 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APOA4P06727 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APOA4P06727 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.16■□□□□ 0.98
APOA4P06727 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APOA4P06727 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.16■□□□□ 0.98
APOA4P06727 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.16■□□□□ 0.98
APOA4P06727 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms