Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.78■□□□□ 0.76
PDGFAP04085 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFAP04085 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.78■□□□□ 0.76
PDGFAP04085 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
PDGFAP04085 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
PDGFAP04085 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 RNF165-205ENST00000588679 2904 ntBASIC19.77■□□□□ 0.76
PDGFAP04085 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.77■□□□□ 0.76
PDGFAP04085 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDGFAP04085 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.77■□□□□ 0.76
PDGFAP04085 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFAP04085 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
PDGFAP04085 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDGFAP04085 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDGFAP04085 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PDGFAP04085 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 FAM201B-201ENST00000458407 597 ntBASIC19.76■□□□□ 0.75
PDGFAP04085 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.76■□□□□ 0.75
PDGFAP04085 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.76■□□□□ 0.75
PDGFAP04085 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDGFAP04085 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.76■□□□□ 0.75
PDGFAP04085 AC133041.1-202ENST00000642053 222 ntBASIC19.76■□□□□ 0.75
PDGFAP04085 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PDGFAP04085 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PDGFAP04085 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDGFAP04085 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDGFAP04085 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.76■□□□□ 0.75
PDGFAP04085 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.75■□□□□ 0.75
PDGFAP04085 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.75■□□□□ 0.75
PDGFAP04085 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.75■□□□□ 0.75
PDGFAP04085 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDGFAP04085 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.75■□□□□ 0.75
PDGFAP04085 AC133552.2-202ENST00000575694 574 ntBASIC19.75■□□□□ 0.75
PDGFAP04085 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFAP04085 AC008687.6-201ENST00000596318 630 ntBASIC19.75■□□□□ 0.75
PDGFAP04085 AC010536.3-201ENST00000620306 533 ntBASIC19.75■□□□□ 0.75
PDGFAP04085 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.75■□□□□ 0.75
PDGFAP04085 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.75■□□□□ 0.75
PDGFAP04085 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.75■□□□□ 0.75
PDGFAP04085 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
PDGFAP04085 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDGFAP04085 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDGFAP04085 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.74■□□□□ 0.75
PDGFAP04085 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDGFAP04085 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.74■□□□□ 0.75
PDGFAP04085 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDGFAP04085 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDGFAP04085 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDGFAP04085 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.73■□□□□ 0.75
PDGFAP04085 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDGFAP04085 AC073210.2-201ENST00000430369 194 ntBASIC19.73■□□□□ 0.75
PDGFAP04085 AC010141.2-201ENST00000452426 721 ntBASIC19.73■□□□□ 0.75
PDGFAP04085 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.73■□□□□ 0.75
PDGFAP04085 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.73■□□□□ 0.75
PDGFAP04085 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.73■□□□□ 0.75
PDGFAP04085 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
PDGFAP04085 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
PDGFAP04085 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDGFAP04085 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFAP04085 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PDGFAP04085 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.72■□□□□ 0.75
PDGFAP04085 EP400NL-214ENST00000641289 2402 ntBASIC19.72■□□□□ 0.75
PDGFAP04085 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFAP04085 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.72■□□□□ 0.75
PDGFAP04085 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFAP04085 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFAP04085 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms