Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.67■□□□□ 0.58
APOC1P02654 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC1P02654 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC1P02654 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC1P02654 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOC1P02654 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.67■□□□□ 0.58
APOC1P02654 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOC1P02654 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC1P02654 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOC1P02654 AC008406.3-201ENST00000620001 1374 ntBASIC18.67■□□□□ 0.58
APOC1P02654 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 AP004607.7-201ENST00000527152 1677 ntBASIC18.66■□□□□ 0.58
APOC1P02654 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.66■□□□□ 0.58
APOC1P02654 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.66■□□□□ 0.58
APOC1P02654 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.66■□□□□ 0.58
APOC1P02654 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.66■□□□□ 0.58
APOC1P02654 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOC1P02654 MIR4767-201ENST00000582827 78 ntBASIC18.66■□□□□ 0.58
APOC1P02654 AL136162.1-201ENST00000607711 1078 ntBASIC18.66■□□□□ 0.58
APOC1P02654 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
APOC1P02654 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.66■□□□□ 0.58
APOC1P02654 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.66■□□□□ 0.58
APOC1P02654 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC1P02654 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.65■□□□□ 0.58
APOC1P02654 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.65■□□□□ 0.58
APOC1P02654 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.65■□□□□ 0.58
APOC1P02654 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.65■□□□□ 0.58
APOC1P02654 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.65■□□□□ 0.58
APOC1P02654 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 AC135279.3-201ENST00000610945 1311 ntBASIC18.65■□□□□ 0.58
APOC1P02654 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC1P02654 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.64■□□□□ 0.58
APOC1P02654 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
APOC1P02654 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
APOC1P02654 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
APOC1P02654 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC1P02654 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.64■□□□□ 0.57
APOC1P02654 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC1P02654 AC126544.1-201ENST00000580842 1059 ntBASIC18.64■□□□□ 0.57
APOC1P02654 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC1P02654 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
APOC1P02654 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC1P02654 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
APOC1P02654 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.64■□□□□ 0.57
APOC1P02654 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOC1P02654 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC1P02654 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
APOC1P02654 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
APOC1P02654 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.64■□□□□ 0.57
APOC1P02654 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOC1P02654 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
APOC1P02654 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.63■□□□□ 0.57
APOC1P02654 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.63■□□□□ 0.57
APOC1P02654 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
APOC1P02654 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
APOC1P02654 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC1P02654 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.62■□□□□ 0.57
APOC1P02654 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APOC1P02654 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms