Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.47■□□□□ 0.39
TGFAP01135 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.47■□□□□ 0.39
TGFAP01135 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.47■□□□□ 0.39
TGFAP01135 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.47■□□□□ 0.39
TGFAP01135 AC016405.3-201ENST00000607710 860 ntBASIC17.47■□□□□ 0.39
TGFAP01135 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.47■□□□□ 0.39
TGFAP01135 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.46■□□□□ 0.39
TGFAP01135 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TGFAP01135 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.46■□□□□ 0.39
TGFAP01135 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.46■□□□□ 0.39
TGFAP01135 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.46■□□□□ 0.39
TGFAP01135 AL512625.2-201ENST00000417533 625 ntBASIC17.46■□□□□ 0.39
TGFAP01135 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.46■□□□□ 0.39
TGFAP01135 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.46■□□□□ 0.39
TGFAP01135 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.46■□□□□ 0.39
TGFAP01135 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.46■□□□□ 0.39
TGFAP01135 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TGFAP01135 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TGFAP01135 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TGFAP01135 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TGFAP01135 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 BX276092.2-201ENST00000417668 665 ntBASIC17.45■□□□□ 0.38
TGFAP01135 AC093787.1-201ENST00000450396 207 ntBASIC17.45■□□□□ 0.38
TGFAP01135 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.45■□□□□ 0.38
TGFAP01135 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.45■□□□□ 0.38
TGFAP01135 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.45■□□□□ 0.38
TGFAP01135 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.45■□□□□ 0.38
TGFAP01135 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.45■□□□□ 0.38
TGFAP01135 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.45■□□□□ 0.38
TGFAP01135 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TGFAP01135 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.45■□□□□ 0.38
TGFAP01135 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TGFAP01135 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.45■□□□□ 0.38
TGFAP01135 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TGFAP01135 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
TGFAP01135 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.44■□□□□ 0.38
TGFAP01135 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.44■□□□□ 0.38
TGFAP01135 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 POU5F1P4-201ENST00000413175 1085 ntBASIC17.44■□□□□ 0.38
TGFAP01135 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.44■□□□□ 0.38
TGFAP01135 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.44■□□□□ 0.38
TGFAP01135 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.44■□□□□ 0.38
TGFAP01135 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.44■□□□□ 0.38
TGFAP01135 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 AC008687.6-201ENST00000596318 630 ntBASIC17.44■□□□□ 0.38
TGFAP01135 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TGFAP01135 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.44■□□□□ 0.38
TGFAP01135 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.44■□□□□ 0.38
TGFAP01135 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.44■□□□□ 0.38
TGFAP01135 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TGFAP01135 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TGFAP01135 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.43■□□□□ 0.38
TGFAP01135 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TGFAP01135 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TGFAP01135 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
TGFAP01135 AC093827.2-201ENST00000512654 315 ntBASIC17.43■□□□□ 0.38
TGFAP01135 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.43■□□□□ 0.38
TGFAP01135 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.43■□□□□ 0.38
TGFAP01135 AC092118.2-201ENST00000613495 667 ntBASIC17.43■□□□□ 0.38
TGFAP01135 ITM2C-210ENST00000620962 501 ntBASIC17.43■□□□□ 0.38
TGFAP01135 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.43■□□□□ 0.38
TGFAP01135 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.43■□□□□ 0.38
TGFAP01135 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.43■□□□□ 0.38
TGFAP01135 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TGFAP01135 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TGFAP01135 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.42■□□□□ 0.38
TGFAP01135 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.42■□□□□ 0.38
TGFAP01135 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.42■□□□□ 0.38
TGFAP01135 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms