Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.9■■□□□ 1.42
GGPS1O95749 AC083906.2-201ENST00000511578 360 ntBASIC23.9■■□□□ 1.42
GGPS1O95749 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.9■■□□□ 1.42
GGPS1O95749 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
GGPS1O95749 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.9■■□□□ 1.42
GGPS1O95749 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
GGPS1O95749 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.89■■□□□ 1.42
GGPS1O95749 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.89■■□□□ 1.42
GGPS1O95749 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
GGPS1O95749 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
GGPS1O95749 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
GGPS1O95749 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
GGPS1O95749 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.89■■□□□ 1.41
GGPS1O95749 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
GGPS1O95749 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
GGPS1O95749 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.88■■□□□ 1.41
GGPS1O95749 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.88■■□□□ 1.41
GGPS1O95749 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.88■■□□□ 1.41
GGPS1O95749 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.88■■□□□ 1.41
GGPS1O95749 SLC7A5P1-201ENST00000568957 537 ntBASIC23.88■■□□□ 1.41
GGPS1O95749 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.88■■□□□ 1.41
GGPS1O95749 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.88■■□□□ 1.41
GGPS1O95749 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.88■■□□□ 1.41
GGPS1O95749 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
GGPS1O95749 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.87■■□□□ 1.41
GGPS1O95749 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.87■■□□□ 1.41
GGPS1O95749 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GGPS1O95749 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GGPS1O95749 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
GGPS1O95749 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
GGPS1O95749 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GGPS1O95749 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.87■■□□□ 1.41
GGPS1O95749 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.87■■□□□ 1.41
GGPS1O95749 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
GGPS1O95749 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GGPS1O95749 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
GGPS1O95749 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
GGPS1O95749 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.86■■□□□ 1.41
GGPS1O95749 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
GGPS1O95749 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.86■■□□□ 1.41
GGPS1O95749 TSPY6P-201ENST00000448518 926 ntBASIC23.86■■□□□ 1.41
GGPS1O95749 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
GGPS1O95749 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
GGPS1O95749 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
GGPS1O95749 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.86■■□□□ 1.41
GGPS1O95749 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 AC080038.3-201ENST00000623346 1952 ntBASIC23.85■■□□□ 1.41
GGPS1O95749 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
GGPS1O95749 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.85■■□□□ 1.41
GGPS1O95749 GUSBP6-202ENST00000438529 1198 ntBASIC23.85■■□□□ 1.41
GGPS1O95749 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.85■■□□□ 1.41
GGPS1O95749 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.85■■□□□ 1.41
GGPS1O95749 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
GGPS1O95749 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
GGPS1O95749 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GGPS1O95749 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.84■■□□□ 1.41
GGPS1O95749 TERF1P5-201ENST00000477545 1207 ntBASIC23.84■■□□□ 1.41
GGPS1O95749 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.84■■□□□ 1.41
GGPS1O95749 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GGPS1O95749 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.84■■□□□ 1.41
GGPS1O95749 AC008175.2-201ENST00000612840 297 ntBASIC23.84■■□□□ 1.41
GGPS1O95749 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
GGPS1O95749 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GGPS1O95749 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
GGPS1O95749 AC092053.2-201ENST00000640557 1818 ntBASIC23.83■■□□□ 1.41
GGPS1O95749 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GGPS1O95749 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
GGPS1O95749 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
GGPS1O95749 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.83■■□□□ 1.41
GGPS1O95749 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.83■■□□□ 1.41
GGPS1O95749 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GGPS1O95749 AC013268.1-206ENST00000638368 961 ntBASIC23.83■■□□□ 1.41
GGPS1O95749 AC112229.1-201ENST00000639295 961 ntBASIC23.83■■□□□ 1.41
GGPS1O95749 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.83■■□□□ 1.41
GGPS1O95749 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
GGPS1O95749 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
GGPS1O95749 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
GGPS1O95749 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.4
GGPS1O95749 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.83■■□□□ 1.4
GGPS1O95749 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GGPS1O95749 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.82■■□□□ 1.4
GGPS1O95749 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms