Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC31.09■■■□□ 2.57
POLR1AO95602 UNC93B5-201ENST00000530315 699 ntBASIC31.09■■■□□ 2.57
POLR1AO95602 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
POLR1AO95602 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
POLR1AO95602 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
POLR1AO95602 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
POLR1AO95602 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.08■■■□□ 2.57
POLR1AO95602 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC31.08■■■□□ 2.57
POLR1AO95602 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC31.08■■■□□ 2.57
POLR1AO95602 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
POLR1AO95602 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
POLR1AO95602 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
POLR1AO95602 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
POLR1AO95602 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
POLR1AO95602 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
POLR1AO95602 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.07■■■□□ 2.56
POLR1AO95602 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.56
POLR1AO95602 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC31.07■■■□□ 2.56
POLR1AO95602 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC31.07■■■□□ 2.56
POLR1AO95602 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.07■■■□□ 2.56
POLR1AO95602 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC31.07■■■□□ 2.56
POLR1AO95602 ISCU-212ENST00000547005 795 ntTSL 3 BASIC31.06■■■□□ 2.56
POLR1AO95602 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC31.06■■■□□ 2.56
POLR1AO95602 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.06■■■□□ 2.56
POLR1AO95602 C9orf163-202ENST00000624034 2573 ntBASIC31.06■■■□□ 2.56
POLR1AO95602 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
POLR1AO95602 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
POLR1AO95602 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
POLR1AO95602 AL353803.4-201ENST00000565882 1934 ntBASIC31.05■■■□□ 2.56
POLR1AO95602 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
POLR1AO95602 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
POLR1AO95602 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
POLR1AO95602 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC31.05■■■□□ 2.56
POLR1AO95602 AC073912.3-201ENST00000624414 853 ntBASIC31.05■■■□□ 2.56
POLR1AO95602 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.05■■■□□ 2.56
POLR1AO95602 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
POLR1AO95602 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
POLR1AO95602 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
POLR1AO95602 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
POLR1AO95602 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
POLR1AO95602 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
POLR1AO95602 AL512625.2-201ENST00000417533 625 ntBASIC31.04■■■□□ 2.56
POLR1AO95602 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC31.04■■■□□ 2.56
POLR1AO95602 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31.04■■■□□ 2.56
POLR1AO95602 AC069236.1-201ENST00000604339 616 ntBASIC31.04■■■□□ 2.56
POLR1AO95602 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
POLR1AO95602 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.04■■■□□ 2.56
POLR1AO95602 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC31.04■■■□□ 2.56
POLR1AO95602 AC055733.4-201ENST00000638462 1354 ntBASIC31.04■■■□□ 2.56
POLR1AO95602 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
POLR1AO95602 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
POLR1AO95602 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
POLR1AO95602 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
POLR1AO95602 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
POLR1AO95602 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
POLR1AO95602 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
POLR1AO95602 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
POLR1AO95602 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
POLR1AO95602 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
POLR1AO95602 AC026366.1-201ENST00000488803 879 ntBASIC31.03■■■□□ 2.56
POLR1AO95602 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
POLR1AO95602 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
POLR1AO95602 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.02■■■□□ 2.56
POLR1AO95602 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC31.02■■■□□ 2.56
POLR1AO95602 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
POLR1AO95602 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.02■■■□□ 2.56
POLR1AO95602 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC31.02■■■□□ 2.56
POLR1AO95602 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
POLR1AO95602 MME-217ENST00000616757 1315 ntTSL 5 BASIC31.02■■■□□ 2.56
POLR1AO95602 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.02■■■□□ 2.56
POLR1AO95602 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
POLR1AO95602 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.01■■■□□ 2.56
POLR1AO95602 TERF1P5-201ENST00000477545 1207 ntBASIC31.01■■■□□ 2.56
POLR1AO95602 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
POLR1AO95602 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.01■■■□□ 2.56
POLR1AO95602 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC31.01■■■□□ 2.55
POLR1AO95602 MIR1224-201ENST00000408193 85 ntBASIC31.01■■■□□ 2.55
POLR1AO95602 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC31.01■■■□□ 2.55
POLR1AO95602 AC097658.1-201ENST00000475555 843 ntBASIC31.01■■■□□ 2.55
POLR1AO95602 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC31.01■■■□□ 2.55
POLR1AO95602 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC31.01■■■□□ 2.55
POLR1AO95602 AC010331.1-201ENST00000611423 582 ntBASIC31.01■■■□□ 2.55
POLR1AO95602 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
POLR1AO95602 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.01■■■□□ 2.55
POLR1AO95602 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
POLR1AO95602 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC31■■■□□ 2.55
POLR1AO95602 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC31■■■□□ 2.55
POLR1AO95602 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
POLR1AO95602 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
POLR1AO95602 ECEL1P3-201ENST00000427961 737 ntBASIC31■■■□□ 2.55
POLR1AO95602 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
POLR1AO95602 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC31■■■□□ 2.55
POLR1AO95602 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC31■■■□□ 2.55
POLR1AO95602 AL359736.2-201ENST00000621992 437 ntBASIC31■■■□□ 2.55
POLR1AO95602 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
POLR1AO95602 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC31■■■□□ 2.55
POLR1AO95602 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
POLR1AO95602 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC31■■■□□ 2.55
POLR1AO95602 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31■■■□□ 2.55
POLR1AO95602 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms