Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAF4O95104 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAF4O95104 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCAF4O95104 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SCAF4O95104 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAF4O95104 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.27■□□□□ 0.36
SCAF4O95104 AC104564.3-201ENST00000582367 638 ntBASIC17.27■□□□□ 0.36
SCAF4O95104 AC131212.1-201ENST00000613771 668 ntBASIC17.27■□□□□ 0.36
SCAF4O95104 MIR6722-201ENST00000617286 78 ntBASIC17.27■□□□□ 0.36
SCAF4O95104 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAF4O95104 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAF4O95104 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAF4O95104 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCAF4O95104 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAF4O95104 OXCT2P1-201ENST00000447263 1535 ntBASIC17.26■□□□□ 0.35
SCAF4O95104 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAF4O95104 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCAF4O95104 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAF4O95104 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCAF4O95104 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAF4O95104 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAF4O95104 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.26■□□□□ 0.35
SCAF4O95104 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCAF4O95104 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCAF4O95104 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCAF4O95104 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAF4O95104 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAF4O95104 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAF4O95104 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAF4O95104 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAF4O95104 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAF4O95104 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAF4O95104 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCAF4O95104 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAF4O95104 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.24■□□□□ 0.35
SCAF4O95104 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCAF4O95104 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.24■□□□□ 0.35
SCAF4O95104 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SCAF4O95104 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAF4O95104 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SCAF4O95104 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.23■□□□□ 0.35
SCAF4O95104 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.23■□□□□ 0.35
SCAF4O95104 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SCAF4O95104 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.23■□□□□ 0.35
SCAF4O95104 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCAF4O95104 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCAF4O95104 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
SCAF4O95104 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAF4O95104 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SCAF4O95104 MIR6724-1-201ENST00000616420 92 ntBASIC17.22■□□□□ 0.35
SCAF4O95104 MIR6724-2-201ENST00000616483 92 ntBASIC17.22■□□□□ 0.35
SCAF4O95104 MIR6724-4-201ENST00000617390 92 ntBASIC17.22■□□□□ 0.35
SCAF4O95104 MIR6724-3-201ENST00000622482 92 ntBASIC17.22■□□□□ 0.35
SCAF4O95104 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.22■□□□□ 0.35
SCAF4O95104 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
SCAF4O95104 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAF4O95104 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCAF4O95104 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAF4O95104 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCAF4O95104 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAF4O95104 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms