Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
BRD4O60885 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
BRD4O60885 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
BRD4O60885 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
BRD4O60885 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
BRD4O60885 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC29.49■■■□□ 2.31
BRD4O60885 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
BRD4O60885 PXK-203ENST00000383715 1756 ntTSL 5 BASIC29.49■■■□□ 2.31
BRD4O60885 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
BRD4O60885 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
BRD4O60885 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
BRD4O60885 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
BRD4O60885 FXN-202ENST00000396364 980 ntTSL 5 BASIC29.48■■■□□ 2.31
BRD4O60885 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC29.48■■■□□ 2.31
BRD4O60885 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
BRD4O60885 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD4O60885 STK25-234ENST00000535007 2459 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD4O60885 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
BRD4O60885 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
BRD4O60885 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
BRD4O60885 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD4O60885 AC073210.2-201ENST00000430369 194 ntBASIC29.47■■■□□ 2.31
BRD4O60885 APTR-205ENST00000447009 902 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD4O60885 CD99P1-205ENST00000527459 561 ntBASIC29.47■■■□□ 2.31
BRD4O60885 SLC7A5P1-201ENST00000568957 537 ntBASIC29.47■■■□□ 2.31
BRD4O60885 AC133552.2-202ENST00000575694 574 ntBASIC29.47■■■□□ 2.31
BRD4O60885 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.47■■■□□ 2.31
BRD4O60885 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC29.47■■■□□ 2.31
BRD4O60885 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
BRD4O60885 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC29.47■■■□□ 2.31
BRD4O60885 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD4O60885 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC29.46■■■□□ 2.31
BRD4O60885 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
BRD4O60885 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC29.46■■■□□ 2.31
BRD4O60885 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.46■■■□□ 2.31
BRD4O60885 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC29.46■■■□□ 2.31
BRD4O60885 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC29.46■■■□□ 2.31
BRD4O60885 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC29.46■■■□□ 2.31
BRD4O60885 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
BRD4O60885 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
BRD4O60885 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
BRD4O60885 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
BRD4O60885 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
BRD4O60885 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC29.45■■■□□ 2.31
BRD4O60885 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
BRD4O60885 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
BRD4O60885 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC29.45■■■□□ 2.31
BRD4O60885 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.45■■■□□ 2.31
BRD4O60885 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.45■■■□□ 2.3
BRD4O60885 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC29.44■■■□□ 2.3
BRD4O60885 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC29.44■■■□□ 2.3
BRD4O60885 AL034346.1-201ENST00000568244 1277 ntBASIC29.44■■■□□ 2.3
BRD4O60885 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC29.44■■■□□ 2.3
BRD4O60885 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
BRD4O60885 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
BRD4O60885 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
BRD4O60885 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
BRD4O60885 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
BRD4O60885 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
BRD4O60885 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
BRD4O60885 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
BRD4O60885 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
BRD4O60885 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC29.43■■■□□ 2.3
BRD4O60885 KRT18P6-201ENST00000555540 1265 ntBASIC29.43■■■□□ 2.3
BRD4O60885 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
BRD4O60885 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
BRD4O60885 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
BRD4O60885 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC29.43■■■□□ 2.3
BRD4O60885 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
BRD4O60885 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC29.43■■■□□ 2.3
BRD4O60885 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC29.42■■■□□ 2.3
BRD4O60885 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
BRD4O60885 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
BRD4O60885 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
BRD4O60885 APTR-203ENST00000430801 583 ntTSL 5 BASIC29.42■■■□□ 2.3
BRD4O60885 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
BRD4O60885 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
BRD4O60885 AC010536.3-201ENST00000620306 533 ntBASIC29.42■■■□□ 2.3
BRD4O60885 TMEM191A-211ENST00000637163 1067 ntBASIC29.42■■■□□ 2.3
BRD4O60885 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
BRD4O60885 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC29.42■■■□□ 2.3
BRD4O60885 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC29.42■■■□□ 2.3
BRD4O60885 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
BRD4O60885 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
BRD4O60885 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC29.41■■■□□ 2.3
BRD4O60885 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
BRD4O60885 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
BRD4O60885 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.41■■■□□ 2.3
BRD4O60885 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
BRD4O60885 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
BRD4O60885 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
BRD4O60885 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.41■■■□□ 2.3
BRD4O60885 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms