Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GFRA3O60609 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
GFRA3O60609 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GFRA3O60609 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.91■□□□□ 0.94
GFRA3O60609 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.91■□□□□ 0.94
GFRA3O60609 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.91■□□□□ 0.94
GFRA3O60609 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.91■□□□□ 0.94
GFRA3O60609 EEF1DP3-203ENST00000566025 782 ntBASIC20.91■□□□□ 0.94
GFRA3O60609 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GFRA3O60609 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GFRA3O60609 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
GFRA3O60609 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.9■□□□□ 0.94
GFRA3O60609 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GFRA3O60609 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GFRA3O60609 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GFRA3O60609 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.9■□□□□ 0.94
GFRA3O60609 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.9■□□□□ 0.94
GFRA3O60609 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GFRA3O60609 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GFRA3O60609 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
GFRA3O60609 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.89■□□□□ 0.93
GFRA3O60609 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 MMP23A-201ENST00000234610 1017 ntBASIC20.89■□□□□ 0.93
GFRA3O60609 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.89■□□□□ 0.93
GFRA3O60609 POM121L13P-201ENST00000422362 380 ntBASIC20.89■□□□□ 0.93
GFRA3O60609 AL355472.2-201ENST00000422958 438 ntBASIC20.89■□□□□ 0.93
GFRA3O60609 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.89■□□□□ 0.93
GFRA3O60609 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 AC053503.5-201ENST00000601508 636 ntBASIC20.89■□□□□ 0.93
GFRA3O60609 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.89■□□□□ 0.93
GFRA3O60609 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
GFRA3O60609 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GFRA3O60609 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GFRA3O60609 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GFRA3O60609 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GFRA3O60609 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.88■□□□□ 0.93
GFRA3O60609 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.88■□□□□ 0.93
GFRA3O60609 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.88■□□□□ 0.93
GFRA3O60609 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GFRA3O60609 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.88■□□□□ 0.93
GFRA3O60609 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.88■□□□□ 0.93
GFRA3O60609 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.88■□□□□ 0.93
GFRA3O60609 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.88■□□□□ 0.93
GFRA3O60609 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GFRA3O60609 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GFRA3O60609 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GFRA3O60609 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.87■□□□□ 0.93
GFRA3O60609 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.87■□□□□ 0.93
GFRA3O60609 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GFRA3O60609 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
GFRA3O60609 AC005521.1-201ENST00000393351 872 ntBASIC20.87■□□□□ 0.93
GFRA3O60609 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.87■□□□□ 0.93
GFRA3O60609 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.87■□□□□ 0.93
GFRA3O60609 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GFRA3O60609 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.87■□□□□ 0.93
GFRA3O60609 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.87■□□□□ 0.93
GFRA3O60609 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
GFRA3O60609 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GFRA3O60609 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
GFRA3O60609 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.86■□□□□ 0.93
GFRA3O60609 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.86■□□□□ 0.93
GFRA3O60609 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.86■□□□□ 0.93
GFRA3O60609 AC087388.1-201ENST00000571370 1112 ntBASIC20.86■□□□□ 0.93
GFRA3O60609 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
GFRA3O60609 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GFRA3O60609 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.86■□□□□ 0.93
GFRA3O60609 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GFRA3O60609 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms