Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 AC092068.2-201ENST00000590491 1708 ntBASIC21.01■□□□□ 0.95
PCDHGA12O60330 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA12O60330 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PCDHGA12O60330 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA12O60330 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGA12O60330 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 AC105036.2-201ENST00000569468 176 ntBASIC21.01■□□□□ 0.95
PCDHGA12O60330 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA12O60330 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA12O60330 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDHGA12O60330 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PCDHGA12O60330 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 APTR-203ENST00000430801 583 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA12O60330 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA12O60330 FAM201B-201ENST00000458407 597 ntBASIC21■□□□□ 0.95
PCDHGA12O60330 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA12O60330 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGA12O60330 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PCDHGA12O60330 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGA12O60330 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGA12O60330 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDHGA12O60330 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
PCDHGA12O60330 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA12O60330 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA12O60330 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 AC079089.2-201ENST00000531211 1277 ntBASIC20.99■□□□□ 0.95
PCDHGA12O60330 SLC7A5P1-201ENST00000568957 537 ntBASIC20.99■□□□□ 0.95
PCDHGA12O60330 MIR4651-201ENST00000582622 73 ntBASIC20.99■□□□□ 0.95
PCDHGA12O60330 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA12O60330 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA12O60330 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA12O60330 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA12O60330 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA12O60330 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA12O60330 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA12O60330 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
PCDHGA12O60330 C1orf229-201ENST00000623686 2258 ntBASIC20.98■□□□□ 0.95
PCDHGA12O60330 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHGA12O60330 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHGA12O60330 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA12O60330 AC013268.1-206ENST00000638368 961 ntBASIC20.97■□□□□ 0.95
PCDHGA12O60330 AC112229.1-201ENST00000639295 961 ntBASIC20.97■□□□□ 0.95
PCDHGA12O60330 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA12O60330 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA12O60330 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA12O60330 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA12O60330 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHGA12O60330 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA12O60330 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGA12O60330 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHGA12O60330 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA12O60330 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA12O60330 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA12O60330 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA12O60330 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA12O60330 MIR4758-201ENST00000577688 71 ntBASIC20.95■□□□□ 0.94
PCDHGA12O60330 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA12O60330 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA12O60330 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA12O60330 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGA12O60330 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA12O60330 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA12O60330 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA12O60330 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA12O60330 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms