Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
NCK2O43639 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NCK2O43639 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.39■■□□□ 1.34
NCK2O43639 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.39■■□□□ 1.34
NCK2O43639 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NCK2O43639 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
NCK2O43639 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
NCK2O43639 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
NCK2O43639 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.39■■□□□ 1.33
NCK2O43639 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.39■■□□□ 1.33
NCK2O43639 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
NCK2O43639 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NCK2O43639 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 AC144652.1-201ENST00000609974 1624 ntBASIC23.38■■□□□ 1.33
NCK2O43639 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.38■■□□□ 1.33
NCK2O43639 MIR663A-201ENST00000385250 93 ntBASIC23.38■■□□□ 1.33
NCK2O43639 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.38■■□□□ 1.33
NCK2O43639 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.38■■□□□ 1.33
NCK2O43639 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
NCK2O43639 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCK2O43639 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.37■■□□□ 1.33
NCK2O43639 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NCK2O43639 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NCK2O43639 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NCK2O43639 LINC01529-204ENST00000636474 1715 ntBASIC23.37■■□□□ 1.33
NCK2O43639 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NCK2O43639 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NCK2O43639 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.37■■□□□ 1.33
NCK2O43639 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.37■■□□□ 1.33
NCK2O43639 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.37■■□□□ 1.33
NCK2O43639 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.37■■□□□ 1.33
NCK2O43639 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NCK2O43639 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.36■■□□□ 1.33
NCK2O43639 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NCK2O43639 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
NCK2O43639 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.36■■□□□ 1.33
NCK2O43639 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.36■■□□□ 1.33
NCK2O43639 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.36■■□□□ 1.33
NCK2O43639 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.36■■□□□ 1.33
NCK2O43639 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCK2O43639 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NCK2O43639 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.36■■□□□ 1.33
NCK2O43639 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.36■■□□□ 1.33
NCK2O43639 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCK2O43639 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCK2O43639 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.35■■□□□ 1.33
NCK2O43639 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.35■■□□□ 1.33
NCK2O43639 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.35■■□□□ 1.33
NCK2O43639 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.35■■□□□ 1.33
NCK2O43639 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.35■■□□□ 1.33
NCK2O43639 AC068587.7-201ENST00000641602 218 ntBASIC23.35■■□□□ 1.33
NCK2O43639 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NCK2O43639 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCK2O43639 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.34■■□□□ 1.33
NCK2O43639 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NCK2O43639 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.34■■□□□ 1.33
NCK2O43639 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NCK2O43639 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NCK2O43639 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.34■■□□□ 1.33
NCK2O43639 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.34■■□□□ 1.33
NCK2O43639 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.34■■□□□ 1.33
NCK2O43639 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.34■■□□□ 1.33
NCK2O43639 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
NCK2O43639 AL121832.2-201ENST00000610979 668 ntBASIC23.34■■□□□ 1.33
NCK2O43639 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.34■■□□□ 1.33
NCK2O43639 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
NCK2O43639 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NCK2O43639 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NCK2O43639 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.33
NCK2O43639 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NCK2O43639 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.33■■□□□ 1.33
NCK2O43639 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
NCK2O43639 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.33■■□□□ 1.33
NCK2O43639 AL024507.2-201ENST00000606070 2574 ntBASIC23.33■■□□□ 1.33
NCK2O43639 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
NCK2O43639 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NCK2O43639 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NCK2O43639 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.33■■□□□ 1.33
NCK2O43639 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms