Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
E2F3O00716 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
E2F3O00716 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
E2F3O00716 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.67■□□□□ 0.9
E2F3O00716 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
E2F3O00716 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.67■□□□□ 0.9
E2F3O00716 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.67■□□□□ 0.9
E2F3O00716 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
E2F3O00716 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
E2F3O00716 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.67■□□□□ 0.9
E2F3O00716 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
E2F3O00716 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
E2F3O00716 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.67■□□□□ 0.9
E2F3O00716 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E2F3O00716 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.66■□□□□ 0.9
E2F3O00716 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.66■□□□□ 0.9
E2F3O00716 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.66■□□□□ 0.9
E2F3O00716 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.66■□□□□ 0.9
E2F3O00716 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.66■□□□□ 0.9
E2F3O00716 AC008764.7-201ENST00000593779 1081 ntBASIC20.66■□□□□ 0.9
E2F3O00716 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.66■□□□□ 0.9
E2F3O00716 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
E2F3O00716 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
E2F3O00716 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
E2F3O00716 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.65■□□□□ 0.9
E2F3O00716 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
E2F3O00716 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
E2F3O00716 AC099791.1-201ENST00000416440 715 ntBASIC20.65■□□□□ 0.9
E2F3O00716 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.65■□□□□ 0.9
E2F3O00716 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.65■□□□□ 0.9
E2F3O00716 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.65■□□□□ 0.9
E2F3O00716 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.65■□□□□ 0.9
E2F3O00716 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.65■□□□□ 0.9
E2F3O00716 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
E2F3O00716 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
E2F3O00716 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
E2F3O00716 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
E2F3O00716 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.64■□□□□ 0.89
E2F3O00716 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
E2F3O00716 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.64■□□□□ 0.89
E2F3O00716 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
E2F3O00716 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.64■□□□□ 0.89
E2F3O00716 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
E2F3O00716 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
E2F3O00716 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
E2F3O00716 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.63■□□□□ 0.89
E2F3O00716 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
E2F3O00716 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.63■□□□□ 0.89
E2F3O00716 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
E2F3O00716 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.63■□□□□ 0.89
E2F3O00716 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
E2F3O00716 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.63■□□□□ 0.89
E2F3O00716 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.63■□□□□ 0.89
E2F3O00716 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.63■□□□□ 0.89
E2F3O00716 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.63■□□□□ 0.89
E2F3O00716 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
E2F3O00716 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
E2F3O00716 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
E2F3O00716 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
E2F3O00716 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
E2F3O00716 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.62■□□□□ 0.89
E2F3O00716 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.62■□□□□ 0.89
E2F3O00716 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
E2F3O00716 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
E2F3O00716 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.62■□□□□ 0.89
E2F3O00716 IRS3P-201ENST00000223076 1006 ntBASIC20.62■□□□□ 0.89
E2F3O00716 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
E2F3O00716 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.62■□□□□ 0.89
E2F3O00716 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
E2F3O00716 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
E2F3O00716 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
E2F3O00716 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
E2F3O00716 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
E2F3O00716 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms