Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK3BL1B0FP48 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 AC083906.2-201ENST00000511578 360 ntBASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 AC231657.2-201ENST00000624556 255 ntBASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPK3BL1B0FP48 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 GUSBP5-202ENST00000510805 1989 ntBASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 MFSD11-216ENST00000590393 1141 ntBASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 AC242852.2-201ENST00000615738 1807 ntBASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK3BL1B0FP48 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 SLC7A5P2-201ENST00000553010 536 ntBASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 AC104187.1-201ENST00000607510 612 ntBASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 AL050303.2-201ENST00000619798 666 ntBASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK3BL1B0FP48 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 GUSBP6-202ENST00000438529 1198 ntBASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK3BL1B0FP48 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
UPK3BL1B0FP48 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.39■■□□□ 1.02
UPK3BL1B0FP48 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UPK3BL1B0FP48 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UPK3BL1B0FP48 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UPK3BL1B0FP48 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
UPK3BL1B0FP48 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms