Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CNN2P6-201ENST00000439038 900 ntBASIC31.64■■■□□ 2.66
HFM1A2PYH4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
HFM1A2PYH4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.64■■■□□ 2.66
HFM1A2PYH4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.64■■■□□ 2.66
HFM1A2PYH4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
HFM1A2PYH4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
HFM1A2PYH4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.63■■■□□ 2.65
HFM1A2PYH4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HFM1A2PYH4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
HFM1A2PYH4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
HFM1A2PYH4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
HFM1A2PYH4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.62■■■□□ 2.65
HFM1A2PYH4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.62■■■□□ 2.65
HFM1A2PYH4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC31.62■■■□□ 2.65
HFM1A2PYH4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
HFM1A2PYH4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.62■■■□□ 2.65
HFM1A2PYH4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC31.62■■■□□ 2.65
HFM1A2PYH4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.62■■■□□ 2.65
HFM1A2PYH4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
HFM1A2PYH4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
HFM1A2PYH4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.61■■■□□ 2.65
HFM1A2PYH4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
HFM1A2PYH4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.61■■■□□ 2.65
HFM1A2PYH4 CROCCP5-201ENST00000436658 830 ntBASIC31.61■■■□□ 2.65
HFM1A2PYH4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
HFM1A2PYH4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.61■■■□□ 2.65
HFM1A2PYH4 AL117328.2-201ENST00000624617 1940 ntBASIC31.61■■■□□ 2.65
HFM1A2PYH4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
HFM1A2PYH4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
HFM1A2PYH4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
HFM1A2PYH4 SLC7A5P2-201ENST00000553010 536 ntBASIC31.6■■■□□ 2.65
HFM1A2PYH4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.6■■■□□ 2.65
HFM1A2PYH4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HFM1A2PYH4 KRT16P2-201ENST00000414673 1423 ntBASIC31.6■■■□□ 2.65
HFM1A2PYH4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.6■■■□□ 2.65
HFM1A2PYH4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HFM1A2PYH4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC31.59■■■□□ 2.65
HFM1A2PYH4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
HFM1A2PYH4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
HFM1A2PYH4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC31.59■■■□□ 2.65
HFM1A2PYH4 AC010536.3-201ENST00000620306 533 ntBASIC31.59■■■□□ 2.65
HFM1A2PYH4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HFM1A2PYH4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC31.59■■■□□ 2.65
HFM1A2PYH4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
HFM1A2PYH4 AC061975.6-201ENST00000579045 1553 ntBASIC31.59■■■□□ 2.65
HFM1A2PYH4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 POU5F1P4-201ENST00000413175 1085 ntBASIC31.58■■■□□ 2.65
HFM1A2PYH4 AC026185.1-201ENST00000445748 174 ntBASIC31.58■■■□□ 2.65
HFM1A2PYH4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HFM1A2PYH4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
HFM1A2PYH4 AL050303.2-201ENST00000619798 666 ntBASIC31.58■■■□□ 2.65
HFM1A2PYH4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
HFM1A2PYH4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
HFM1A2PYH4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HFM1A2PYH4 MIR663A-201ENST00000385250 93 ntBASIC31.57■■■□□ 2.64
HFM1A2PYH4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.57■■■□□ 2.64
HFM1A2PYH4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.57■■■□□ 2.64
HFM1A2PYH4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC31.57■■■□□ 2.64
HFM1A2PYH4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.57■■■□□ 2.64
HFM1A2PYH4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
HFM1A2PYH4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
HFM1A2PYH4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
HFM1A2PYH4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
HFM1A2PYH4 C11orf96-202ENST00000528572 1834 ntBASIC31.56■■■□□ 2.64
HFM1A2PYH4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
HFM1A2PYH4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
HFM1A2PYH4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.56■■■□□ 2.64
HFM1A2PYH4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
HFM1A2PYH4 GOLGA2P6-201ENST00000340929 2049 ntBASIC31.55■■■□□ 2.64
HFM1A2PYH4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC31.55■■■□□ 2.64
HFM1A2PYH4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HFM1A2PYH4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.55■■■□□ 2.64
HFM1A2PYH4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HFM1A2PYH4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HFM1A2PYH4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HFM1A2PYH4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HFM1A2PYH4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC31.54■■■□□ 2.64
HFM1A2PYH4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
HFM1A2PYH4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HFM1A2PYH4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms