Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRBV6-1A0A0K0K1D8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-1A0A0K0K1D8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-1A0A0K0K1D8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 KRT8P33-201ENST00000508125 1423 ntBASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 OR2I1P-207ENST00000453522 948 ntBASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 AL117332.1-201ENST00000622628 974 ntBASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 AC073314.1-201ENST00000568729 2216 ntBASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-1A0A0K0K1D8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 pRNA.6-201ENST00000610482 90 ntBASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 pRNA.5-201ENST00000612139 90 ntBASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 pRNA.11-201ENST00000618423 90 ntBASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 pRNA.13-201ENST00000619112 90 ntBASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-1A0A0K0K1D8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.83■□□□□ 0.13
TRBV6-1A0A0K0K1D8 AC007952.6-201ENST00000573168 2673 ntBASIC15.83■□□□□ 0.13
TRBV6-1A0A0K0K1D8 AC003957.1-201ENST00000625108 2673 ntBASIC15.83■□□□□ 0.13
TRBV6-1A0A0K0K1D8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-1A0A0K0K1D8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 KRT125P-201ENST00000546827 989 ntBASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRBV6-1A0A0K0K1D8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms