Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 AL033527.3-201ENST00000566366 1196 ntBASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV27A0A0K0K1C4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 AC010997.5-201ENST00000609182 354 ntBASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 AL117332.1-201ENST00000622628 974 ntBASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 AP005212.1-201ENST00000581547 1997 ntBASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRBV27A0A0K0K1C4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV27A0A0K0K1C4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 AC003102.1-202ENST00000563394 1796 ntBASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 AC006128.1-201ENST00000624704 1661 ntBASIC14.96□□□□□ -0.01
TRBV27A0A0K0K1C4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV27A0A0K0K1C4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV27A0A0K0K1C4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.96□□□□□ -0.02
TRBV27A0A0K0K1C4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 AC010141.3-201ENST00000456659 717 ntBASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 pRNA.6-201ENST00000610482 90 ntBASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 pRNA.5-201ENST00000612139 90 ntBASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 pRNA.11-201ENST00000618423 90 ntBASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 pRNA.13-201ENST00000619112 90 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms