Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LOC102724428A0A0B4J2F2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 UNC93B5-201ENST00000530315 699 ntBASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC243732.1-201ENST00000612648 864 ntBASIC27.28■■□□□ 1.96
LOC102724428A0A0B4J2F2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 RPS2P4-201ENST00000476944 856 ntBASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LOC102724428A0A0B4J2F2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC026366.1-201ENST00000488803 879 ntBASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LOC102724428A0A0B4J2F2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC137767.1-201ENST00000602918 1920 ntBASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LOC102724428A0A0B4J2F2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.24■■□□□ 1.95
LOC102724428A0A0B4J2F2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC073648.6-201ENST00000641589 218 ntBASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LOC102724428A0A0B4J2F2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.22■■□□□ 1.95
LOC102724428A0A0B4J2F2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
LOC102724428A0A0B4J2F2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.22■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LOC102724428A0A0B4J2F2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.22■■□□□ 1.95
LOC102724428A0A0B4J2F2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
LOC102724428A0A0B4J2F2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LOC102724428A0A0B4J2F2 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms