Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TTC8-206ENST00000380656 2171 ntTSL 2 BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 AC024257.3-201ENST00000595310 3645 ntBASIC11.91□□□□□ -0.5
LMO3Q8TAP4 LRRC3B-203ENST00000417744 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 ZDHHC22-201ENST00000319374 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LMO3Q8TAP4 RABGEF1-208ENST00000510829 3553 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 LEMD1-AS1-201ENST00000447832 2781 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 LAMP3-201ENST00000265598 3375 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ANKRD26P1-201ENST00000566201 3921 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 CSPG4P10-202ENST00000612093 3411 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 RFPL4AL1-201ENST00000341750 908 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 MRPL21-201ENST00000362034 683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 GSTM5-202ENST00000369812 657 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 COX15-202ENST00000370483 2788 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC246787.1-201ENST00000392301 627 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 HBA2-202ENST00000397806 513 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AL359641.1-201ENST00000412509 1558 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ZFYVE9P1-201ENST00000416133 1724 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC009502.1-204ENST00000442416 361 ntTSL 3 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 RN7SL771P-201ENST00000482328 298 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 RN7SL229P-201ENST00000495651 299 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 GK3P-201ENST00000505354 1868 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 MRPL27-206ENST00000511860 869 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 TMEM161B-213ENST00000514135 2035 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC018563.1-202ENST00000560602 417 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC010761.4-201ENST00000577325 521 ntTSL 3 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC090912.2-204ENST00000583086 571 ntTSL 4 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC024575.1-201ENST00000590399 682 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 LINC01872-201ENST00000594261 915 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 MIR663AHG-208ENST00000596058 665 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AC073592.9-201ENST00000624885 371 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 HCP5B-201ENST00000630472 1889 ntBASIC11.9□□□□□ -0.5
LMO3Q8TAP4 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 TRPV5-203ENST00000442623 2120 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 MMP2-203ENST00000543485 1978 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 NPHS1-201ENST00000353632 3741 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ZNF544-213ENST00000599227 3587 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 SEC14L1-227ENST00000591437 2828 ntTSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ACAD11-201ENST00000264990 4142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 EIF4E2-203ENST00000409167 1372 ntTSL 2 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
LMO3Q8TAP4 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LMO3Q8TAP4 SLC7A3-202ENST00000374299 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LMO3Q8TAP4 NLRP12-203ENST00000391772 3205 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
LMO3Q8TAP4 AL160006.1-201ENST00000554749 4216 ntBASIC11.9□□□□□ -0.51
LMO3Q8TAP4 RBMY1E-202ENST00000382658 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
LMO3Q8TAP4 CTAGE6-201ENST00000470691 2608 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
LMO3Q8TAP4 OR3A4P-201ENST00000323164 1624 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 LILRB4-203ENST00000391734 1602 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 PIWIL2-202ENST00000454009 3442 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 ZFYVE28-206ENST00000508471 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 PTCH2-201ENST00000372192 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 CLGN-202ENST00000414773 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC012074.1-201ENST00000313031 1552 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AL358472.2-201ENST00000608236 1418 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 RPL10P2-201ENST00000310599 670 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 DEFA1-201ENST00000382679 406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 C5orf52-201ENST00000409999 686 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC006001.3-205ENST00000428370 579 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 CHCHD3P3-201ENST00000446783 640 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 RN7SL309P-201ENST00000491364 286 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 RPL30-213ENST00000523172 274 ntTSL 5 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC009065.2-202ENST00000563284 506 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC083801.2-201ENST00000565024 1180 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 MIR4747-201ENST00000584057 54 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 TBCB-207ENST00000586868 466 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC011477.4-201ENST00000590274 609 ntTSL 3 BASIC11.89□□□□□ -0.51
LMO3Q8TAP4 MIR8079-201ENST00000610873 72 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 MYO5BP1-201ENST00000610994 1239 ntBASIC11.89□□□□□ -0.51
LMO3Q8TAP4 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms