Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 LY6G5B-208ENST00000409525 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 USP4-204ENST00000416417 1536 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 GPR85-204ENST00000449591 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 AC139493.2-201ENST00000508056 1612 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 TP53TG3E-202ENST00000623491 2026 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 RBM12B-208ENST00000627241 2646 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 BCAR3-202ENST00000370243 3200 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 NUDT7-201ENST00000268533 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
MCF2LO15068 LDHAL6FP-201ENST00000405916 1082 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 RN7SKP73-201ENST00000411075 292 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 NME6-207ENST00000426689 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 ZNF776-202ENST00000431353 549 ntTSL 4 BASIC11.86□□□□□ -0.51
MCF2LO15068 ADH5P4-201ENST00000433151 1110 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 TEX51-204ENST00000450035 736 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
MCF2LO15068 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC11.86□□□□□ -0.51
MCF2LO15068 AC106774.3-201ENST00000505444 169 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 AC113410.2-201ENST00000507389 678 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 IGHV3-60-201ENST00000521678 354 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 ABCC6P2-201ENST00000526069 590 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 NUDT7-205ENST00000564085 899 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 AC245884.8-201ENST00000599382 880 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 HCG18-241ENST00000602290 821 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 AC131055.2-201ENST00000610586 248 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC11.86□□□□□ -0.51
MCF2LO15068 AP001059.2-201ENST00000620163 449 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 NEAT1_1.1-201ENST00000620348 120 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 AC079331.1-201ENST00000623200 1200 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 TCF4-204ENST00000457482 2372 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 NLRP12-201ENST00000324134 3801 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 PAMR1-206ENST00000615849 2801 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 ZNF793-209ENST00000589319 1915 ntTSL 5 BASIC11.86□□□□□ -0.51
MCF2LO15068 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC11.86□□□□□ -0.51
MCF2LO15068 PKD2-205ENST00000508588 1720 ntTSL 2 BASIC11.86□□□□□ -0.51
MCF2LO15068 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MCF2LO15068 LINC00852-201ENST00000475197 1328 ntBASIC11.86□□□□□ -0.51
MCF2LO15068 TRPC7-206ENST00000513104 2987 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 MYO10-203ENST00000505695 4803 ntTSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 GOLGA8DP-201ENST00000314246 2786 ntTSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 TAF6-213ENST00000472509 2551 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 DHX37-206ENST00000544745 4112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 CORO2B-202ENST00000540068 3332 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 ZFAND4-202ENST00000344646 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 RTEL1P1-201ENST00000504490 3685 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 SIGLEC10-207ENST00000442846 2442 ntTSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 UPP2-204ENST00000605860 2435 ntTSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC11.85□□□□□ -0.51
MCF2LO15068 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 ATP6V1G2-206ENST00000376151 1261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 PYY3-201ENST00000419078 213 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 PRAMEF32P-201ENST00000431596 1068 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 AC119749.1-201ENST00000454884 691 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 RN7SL164P-201ENST00000482613 303 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 CMSS1-205ENST00000489081 1056 ntTSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 LINC01950-201ENST00000505997 602 ntTSL 3 BASIC11.85□□□□□ -0.51
MCF2LO15068 AC112722.1-201ENST00000514884 587 ntTSL 4 BASIC11.85□□□□□ -0.51
MCF2LO15068 AC069120.3-201ENST00000519764 537 ntTSL 4 BASIC11.85□□□□□ -0.51
MCF2LO15068 CR383656.9-201ENST00000546860 1178 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 ARL1-209ENST00000551671 879 ntTSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC11.85□□□□□ -0.51
MCF2LO15068 AC136944.3-202ENST00000567422 509 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC11.85□□□□□ -0.51
MCF2LO15068 AC012498.2-201ENST00000604586 372 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 CTCFL-221ENST00000608903 2135 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MCF2LO15068 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
MCF2LO15068 NASP-225ENST00000629893 253 ntTSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 SATB1-AS1-262ENST00000629984 759 ntTSL 5 BASIC11.85□□□□□ -0.51
MCF2LO15068 AL139353.3-201ENST00000635085 411 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 AL669831.6-201ENST00000635557 837 ntBASIC11.85□□□□□ -0.51
MCF2LO15068 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 357.7 ms