Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CSPG4P3Y-201ENST00000418188 3724 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 MYO15A-203ENST00000418233 3411 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ZNRD1-202ENST00000359374 743 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 OR2A42-201ENST00000391496 933 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 OR2A1-201ENST00000408951 933 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 LYG2-203ENST00000409679 878 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 LINC01518-201ENST00000411439 519 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ADORA2BP1-201ENST00000429195 842 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 HORMAD2-AS1-201ENST00000429350 902 ntTSL 3 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AC092017.1-201ENST00000431591 659 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PQLC1P1-201ENST00000434950 429 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AC069454.1-201ENST00000465845 468 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 THOC7-204ENST00000469584 836 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ACP2-209ENST00000530453 826 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 RAB11A-203ENST00000564910 978 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AC025211.1-201ENST00000582272 373 ntTSL 3 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 SMIM22-204ENST00000588606 394 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AC020913.1-202ENST00000599360 467 ntTSL 3 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 CBR3-AS1-205ENST00000608622 586 ntTSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 Metazoa_SRP.171-201ENST00000614579 289 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 LINC01395-201ENST00000631195 982 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AP000911.1-203ENST00000529070 1673 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 C3orf20-203ENST00000435614 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 RHO-201ENST00000296271 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PPIP5K1-205ENST00000381879 5487 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 SLC28A1-202ENST00000338602 1360 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AC009159.4-201ENST00000624606 2031 ntBASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 KANK4-203ENST00000371150 3023 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 FCRL3-202ENST00000368186 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ZPR1-201ENST00000227322 6566 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 WSB2-203ENST00000535496 1328 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 PIGN-223ENST00000638369 4205 ntTSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 LINC00327-201ENST00000443778 2087 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ZNF527-202ENST00000436120 2828 ntAPPRIS P1 TSL 4 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 LAIR1-203ENST00000391742 4901 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 C1orf186-201ENST00000331555 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 LRRC3B-203ENST00000417744 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 NPSR1-201ENST00000359791 1410 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 FYN-201ENST00000229471 2009 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ZC3HC1-201ENST00000311873 2017 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 CIDECP-204ENST00000432401 1794 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 VRK3-223ENST00000601341 1777 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 FCRLA-203ENST00000309691 901 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 CRABP2-203ENST00000368222 992 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 CDY6P-201ENST00000413320 1266 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 MRPS21P6-201ENST00000415184 261 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 IGHV3OR16-10-201ENST00000425181 350 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 LRTOMT-208ENST00000439209 801 ntTSL 3 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 NOP56P1-203ENST00000440030 372 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 OR7E111P-201ENST00000442229 1014 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC121251.1-201ENST00000451481 249 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 NREP-208ENST00000453526 559 ntAPPRIS P1 TSL 4 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 BTN2A2-209ENST00000482536 1068 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 OR2A9P-203ENST00000484189 933 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 DLEU1-232ENST00000491341 1141 ntTSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 OR2A20P-202ENST00000496731 933 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC145098.1-201ENST00000506025 434 ntTSL 3 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 SFTPC-206ENST00000522109 921 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 LINC02253-202ENST00000560314 565 ntTSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC090772.2-201ENST00000578443 564 ntTSL 4 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AFMID-208ENST00000588800 647 ntTSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC008738.4-201ENST00000590492 700 ntTSL 3 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC008555.5-202ENST00000604749 570 ntTSL 4 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC016737.1-201ENST00000605739 1068 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 CU638689.3-201ENST00000624266 1031 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC239585.2-202ENST00000624629 434 ntTSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC243547.3-202ENST00000625258 192 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 AC073488.4-201ENST00000632688 757 ntBASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
NPIPA3F8WFD2 TLDC1-201ENST00000343629 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms