Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCND2-201ENST00000261254 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NPIPA3F8WFD2 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
NPIPA3F8WFD2 DLAT-201ENST00000280346 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
NPIPA3F8WFD2 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
NPIPA3F8WFD2 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC10.4□□□□□ -0.75
NPIPA3F8WFD2 ACAN-203ENST00000558207 4159 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
NPIPA3F8WFD2 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 FCRL3-201ENST00000368184 4725 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PRKG2-202ENST00000395578 3431 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 CWH43-204ENST00000513409 2390 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SPRYD3-201ENST00000301463 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SMIM15-201ENST00000339020 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 ZNF18-202ENST00000454073 2261 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PCID2-204ENST00000375459 1668 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SNRNP35-201ENST00000350887 942 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AZIN2-202ENST00000373440 616 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 CATIP-AS2-201ENST00000411433 535 ntTSL 3 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SNRNP35-202ENST00000412157 1140 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AL732414.1-201ENST00000413346 573 ntBASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 RPL12P2-201ENST00000424565 493 ntBASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 LINC01682-201ENST00000435973 385 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 RPSAP11-201ENST00000443010 881 ntBASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 HNRNPA3P8-201ENST00000474219 974 ntBASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 RPL7AP4-201ENST00000483820 769 ntBASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AC010275.1-201ENST00000504081 565 ntTSL 4 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AL672043.1-201ENST00000506599 395 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AL049836.1-201ENST00000553270 539 ntTSL 3 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AC015712.1-204ENST00000558254 755 ntTSL 3 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 ANKRD20A2-203ENST00000611747 520 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 ANKRD20A4-203ENST00000615302 520 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PTPN7-219ENST00000629151 437 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PAX8-AS1-205ENST00000437551 2390 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SH3TC2-211ENST00000512049 4002 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 NMNAT2-202ENST00000294868 5448 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 DENND2A-209ENST00000496613 3562 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
NPIPA3F8WFD2 SLC4A1-202ENST00000399246 3855 ntTSL 5 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 PSMD1-201ENST00000308696 3326 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 MED6-202ENST00000430055 1507 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 SH3PXD2A-AS1-202ENST00000627886 2027 ntTSL 4 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 LYPD6-203ENST00000409381 3578 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 ETV1-204ENST00000403685 1603 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 NME1-201ENST00000013034 796 ntTSL 3 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 CALCB-201ENST00000324229 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 LYZL2-201ENST00000375318 818 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 Z97353.1-201ENST00000422915 578 ntBASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 GAPDHP1-201ENST00000452570 1005 ntBASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 RN7SL110P-201ENST00000498222 283 ntBASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC079942.1-201ENST00000505557 384 ntTSL 3 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AP003692.1-202ENST00000510185 502 ntTSL 3 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC122719.2-201ENST00000511936 420 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC139495.2-201ENST00000514492 1087 ntBASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC091163.2-201ENST00000519032 460 ntTSL 5 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 RAB30-203ENST00000525117 937 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AP005018.2-201ENST00000528464 822 ntBASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 NXF1-208ENST00000531131 1023 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 LINC02414-201ENST00000537280 494 ntTSL 4 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC106736.1-201ENST00000567721 434 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC005154.1-231ENST00000583664 431 ntTSL 4 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AC009271.1-201ENST00000589440 518 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 AL359747.1-202ENST00000606028 918 ntBASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 N6AMT1-202ENST00000351429 4781 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 CDHR1-206ENST00000623527 6781 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 HMGN3-AS1-201ENST00000604516 2946 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms