Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 EEF1DP3-203ENST00000566025 782 ntBASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TNFRSF11AQ9Y6Q6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.2■■□□□ 1.79
TNFRSF11AQ9Y6Q6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TNFRSF11AQ9Y6Q6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AL137784.2-201ENST00000607332 1000 ntBASIC26.2■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.2■■□□□ 1.78
TNFRSF11AQ9Y6Q6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TNFRSF11AQ9Y6Q6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TNFRSF11AQ9Y6Q6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.18■■□□□ 1.78
TNFRSF11AQ9Y6Q6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.18■■□□□ 1.78
TNFRSF11AQ9Y6Q6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TNFRSF11AQ9Y6Q6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.18■■□□□ 1.78
TNFRSF11AQ9Y6Q6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.18■■□□□ 1.78
TNFRSF11AQ9Y6Q6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TNFRSF11AQ9Y6Q6 C11orf96-202ENST00000528572 1834 ntBASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
TNFRSF11AQ9Y6Q6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TNFRSF11AQ9Y6Q6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AC137761.2-201ENST00000561729 223 ntBASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AC145350.3-201ENST00000569033 163 ntBASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AP001160.3-201ENST00000601484 763 ntBASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 AC011767.1-201ENST00000617410 1153 ntBASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.14■■□□□ 1.78
TNFRSF11AQ9Y6Q6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
TNFRSF11AQ9Y6Q6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TNFRSF11AQ9Y6Q6 KRT19P1-201ENST00000405746 1186 ntBASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms