Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CSNK1G3Q9Y6M4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1G3Q9Y6M4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.83■□□□□ 0.93
CSNK1G3Q9Y6M4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.83■□□□□ 0.93
CSNK1G3Q9Y6M4 GUSBP6-202ENST00000438529 1198 ntBASIC20.83■□□□□ 0.93
CSNK1G3Q9Y6M4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1G3Q9Y6M4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1G3Q9Y6M4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1G3Q9Y6M4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 AF201337.1-201ENST00000520239 748 ntBASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 AC013268.1-206ENST00000638368 961 ntBASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 AC112229.1-201ENST00000639295 961 ntBASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1G3Q9Y6M4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1G3Q9Y6M4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 TERF1P5-201ENST00000477545 1207 ntBASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1G3Q9Y6M4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 AC137767.1-201ENST00000602918 1920 ntBASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1G3Q9Y6M4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 AC073210.2-201ENST00000430369 194 ntBASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 AC007322.4-201ENST00000509611 723 ntBASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 CD99P1-205ENST00000527459 561 ntBASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 AC087742.1-201ENST00000575880 1738 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms