Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN16Q9Y5I7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 AC104187.1-201ENST00000607510 612 ntBASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN16Q9Y5I7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CLDN16Q9Y5I7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CLDN16Q9Y5I7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 AC053503.5-201ENST00000601508 636 ntBASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN16Q9Y5I7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 AC022517.1-201ENST00000592429 346 ntBASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN16Q9Y5I7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 AC092437.1-201ENST00000624794 1048 ntBASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN16Q9Y5I7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 AC079834.2-201ENST00000609776 1949 ntBASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN16Q9Y5I7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 AC138907.5-202ENST00000569484 235 ntBASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 AC104564.3-201ENST00000582367 638 ntBASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLDN16Q9Y5I7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN16Q9Y5I7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms