Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1DQ9Y2S0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1DQ9Y2S0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1DQ9Y2S0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR1DQ9Y2S0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
POLR1DQ9Y2S0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 BX842568.3-201ENST00000418104 571 ntBASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR1DQ9Y2S0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 AC096631.2-201ENST00000436136 790 ntBASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR1DQ9Y2S0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 AC007375.3-201ENST00000600936 2314 ntBASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
POLR1DQ9Y2S0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 AC104564.3-201ENST00000582367 638 ntBASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 AC233992.3-201ENST00000607491 485 ntBASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
POLR1DQ9Y2S0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 AP004607.7-201ENST00000527152 1677 ntBASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 PBX2P1-201ENST00000493219 1291 ntBASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
POLR1DQ9Y2S0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
POLR1DQ9Y2S0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
POLR1DQ9Y2S0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
POLR1DQ9Y2S0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
POLR1DQ9Y2S0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.89■□□□□ 0.61
POLR1DQ9Y2S0 AC244015.2-201ENST00000616358 1861 ntBASIC18.89■□□□□ 0.61
POLR1DQ9Y2S0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
POLR1DQ9Y2S0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
POLR1DQ9Y2S0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms