Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 MAP2K4P1-201ENST00000438453 1195 ntBASIC29.26■■■□□ 2.28
NINLQ9Y2I6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC29.26■■■□□ 2.28
NINLQ9Y2I6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC29.26■■■□□ 2.28
NINLQ9Y2I6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC29.26■■■□□ 2.28
NINLQ9Y2I6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
NINLQ9Y2I6 C1orf229-201ENST00000623686 2258 ntBASIC29.26■■■□□ 2.28
NINLQ9Y2I6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC29.26■■■□□ 2.27
NINLQ9Y2I6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
NINLQ9Y2I6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
NINLQ9Y2I6 AL355802.2-201ENST00000402069 882 ntBASIC29.26■■■□□ 2.27
NINLQ9Y2I6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC29.26■■■□□ 2.27
NINLQ9Y2I6 AC007322.4-201ENST00000509611 723 ntBASIC29.26■■■□□ 2.27
NINLQ9Y2I6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC29.26■■■□□ 2.27
NINLQ9Y2I6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 AC080038.3-201ENST00000623346 1952 ntBASIC29.25■■■□□ 2.27
NINLQ9Y2I6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 AC013268.1-206ENST00000638368 961 ntBASIC29.25■■■□□ 2.27
NINLQ9Y2I6 AC112229.1-201ENST00000639295 961 ntBASIC29.25■■■□□ 2.27
NINLQ9Y2I6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC29.25■■■□□ 2.27
NINLQ9Y2I6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 POU5F1P4-201ENST00000413175 1085 ntBASIC29.24■■■□□ 2.27
NINLQ9Y2I6 AC007322.1-201ENST00000426983 750 ntBASIC29.24■■■□□ 2.27
NINLQ9Y2I6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
NINLQ9Y2I6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
NINLQ9Y2I6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 KRT16P2-201ENST00000414673 1423 ntBASIC29.22■■■□□ 2.27
NINLQ9Y2I6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 AC005181.1-201ENST00000604782 1256 ntBASIC29.22■■■□□ 2.27
NINLQ9Y2I6 AC008175.2-201ENST00000612840 297 ntBASIC29.22■■■□□ 2.27
NINLQ9Y2I6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
NINLQ9Y2I6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
NINLQ9Y2I6 AC003102.1-202ENST00000563394 1796 ntBASIC29.21■■■□□ 2.27
NINLQ9Y2I6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC29.21■■■□□ 2.27
NINLQ9Y2I6 CD99P1-205ENST00000527459 561 ntBASIC29.21■■■□□ 2.27
NINLQ9Y2I6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.21■■■□□ 2.27
NINLQ9Y2I6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC29.2■■■□□ 2.27
NINLQ9Y2I6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
NINLQ9Y2I6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC29.2■■■□□ 2.27
NINLQ9Y2I6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
NINLQ9Y2I6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC29.2■■■□□ 2.27
NINLQ9Y2I6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 APTR-203ENST00000430801 583 ntTSL 5 BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
NINLQ9Y2I6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 SLC7A5P2-201ENST00000553010 536 ntBASIC29.19■■■□□ 2.26
NINLQ9Y2I6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NINLQ9Y2I6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC29.18■■■□□ 2.26
NINLQ9Y2I6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms