Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAPPC4Q9Y296 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAPPC4Q9Y296 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAPPC4Q9Y296 TSPY26P-201ENST00000476365 1326 ntBASIC19.47■□□□□ 0.71
TRAPPC4Q9Y296 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAPPC4Q9Y296 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAPPC4Q9Y296 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 OR7E47P-201ENST00000546390 1422 ntBASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAPPC4Q9Y296 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 RNF165-205ENST00000588679 2904 ntBASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 LINC01521-201ENST00000504184 1943 ntBASIC19.45■□□□□ 0.7
TRAPPC4Q9Y296 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAPPC4Q9Y296 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 MIR572-201ENST00000384983 95 ntBASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 AC010542.4-201ENST00000563151 1910 ntBASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAPPC4Q9Y296 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAPPC4Q9Y296 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAPPC4Q9Y296 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TRAPPC4Q9Y296 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAPPC4Q9Y296 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAPPC4Q9Y296 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms