Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 AC123595.1-201ENST00000440769 1046 ntBASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 LINC02228-203ENST00000641970 1355 ntBASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CUEDC1Q9NWM3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 CCDC92B-201ENST00000575506 885 ntBASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CUEDC1Q9NWM3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 AC003102.1-202ENST00000563394 1796 ntBASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 FBXW4P1-201ENST00000426721 2239 ntBASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 KRT18P5-201ENST00000436075 1291 ntBASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CUEDC1Q9NWM3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 TERF1P2-201ENST00000583350 1212 ntBASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CUEDC1Q9NWM3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CUEDC1Q9NWM3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.52■□□□□ 0.87
CUEDC1Q9NWM3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CUEDC1Q9NWM3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CUEDC1Q9NWM3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms