Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF216Q9NWF9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 IKBKGP1-201ENST00000612193 1073 ntBASIC24.04■■□□□ 1.44
RNF216Q9NWF9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.04■■□□□ 1.44
RNF216Q9NWF9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF216Q9NWF9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 GUSBP5-202ENST00000510805 1989 ntBASIC24.03■■□□□ 1.44
RNF216Q9NWF9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
RNF216Q9NWF9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 AL031058.1-201ENST00000561592 888 ntBASIC24.02■■□□□ 1.44
RNF216Q9NWF9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 AC004908.3-201ENST00000610248 625 ntBASIC24.02■■□□□ 1.44
RNF216Q9NWF9 AC087239.1-201ENST00000622671 572 ntBASIC24.02■■□□□ 1.44
RNF216Q9NWF9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF216Q9NWF9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF216Q9NWF9 DUSP8P3-201ENST00000399571 1760 ntBASIC24.01■■□□□ 1.43
RNF216Q9NWF9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24■■□□□ 1.43
RNF216Q9NWF9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RNF216Q9NWF9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF216Q9NWF9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RNF216Q9NWF9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF216Q9NWF9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24■■□□□ 1.43
RNF216Q9NWF9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF216Q9NWF9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24■■□□□ 1.43
RNF216Q9NWF9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24■■□□□ 1.43
RNF216Q9NWF9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF216Q9NWF9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF216Q9NWF9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF216Q9NWF9 LINC00526-201ENST00000581067 1875 ntBASIC24■■□□□ 1.43
RNF216Q9NWF9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RNF216Q9NWF9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24■■□□□ 1.43
RNF216Q9NWF9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF216Q9NWF9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RNF216Q9NWF9 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.99■■□□□ 1.43
RNF216Q9NWF9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF216Q9NWF9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF216Q9NWF9 AC007375.3-201ENST00000600936 2314 ntBASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms