Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.75■■□□□ 1.23
CISHQ9NSE2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CISHQ9NSE2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CISHQ9NSE2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.74■■□□□ 1.23
CISHQ9NSE2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.74■■□□□ 1.23
CISHQ9NSE2 MIR6821-201ENST00000617625 74 ntBASIC22.74■■□□□ 1.23
CISHQ9NSE2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.74■■□□□ 1.23
CISHQ9NSE2 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.74■■□□□ 1.23
CISHQ9NSE2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CISHQ9NSE2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.73■■□□□ 1.23
CISHQ9NSE2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.73■■□□□ 1.23
CISHQ9NSE2 KRT18P14-201ENST00000534205 1250 ntBASIC22.73■■□□□ 1.23
CISHQ9NSE2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.73■■□□□ 1.23
CISHQ9NSE2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CISHQ9NSE2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.73■■□□□ 1.23
CISHQ9NSE2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CISHQ9NSE2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CISHQ9NSE2 AC026271.2-201ENST00000428091 497 ntBASIC22.72■■□□□ 1.23
CISHQ9NSE2 AC079140.4-201ENST00000507448 529 ntBASIC22.72■■□□□ 1.23
CISHQ9NSE2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 RARRES2P6-201ENST00000567333 442 ntBASIC22.72■■□□□ 1.23
CISHQ9NSE2 AC104564.3-201ENST00000582367 638 ntBASIC22.72■■□□□ 1.23
CISHQ9NSE2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CISHQ9NSE2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CISHQ9NSE2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CISHQ9NSE2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.72■■□□□ 1.23
CISHQ9NSE2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CISHQ9NSE2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CISHQ9NSE2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CISHQ9NSE2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CISHQ9NSE2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.71■■□□□ 1.23
CISHQ9NSE2 AC087623.3-201ENST00000607047 1098 ntBASIC22.71■■□□□ 1.23
CISHQ9NSE2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.71■■□□□ 1.23
CISHQ9NSE2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CISHQ9NSE2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CISHQ9NSE2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.71■■□□□ 1.23
CISHQ9NSE2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CISHQ9NSE2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CISHQ9NSE2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.7■■□□□ 1.22
CISHQ9NSE2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CISHQ9NSE2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.69■■□□□ 1.22
CISHQ9NSE2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.69■■□□□ 1.22
CISHQ9NSE2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
CISHQ9NSE2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CISHQ9NSE2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L2-201ENST00000561772 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L6-201ENST00000626483 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L1-201ENST00000627662 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L8-201ENST00000629013 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L3-201ENST00000630187 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L7-201ENST00000630678 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 DUX4L5-201ENST00000630834 1275 ntBASIC22.69■■□□□ 1.22
CISHQ9NSE2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.69■■□□□ 1.22
CISHQ9NSE2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CISHQ9NSE2 AC244015.2-201ENST00000616358 1861 ntBASIC22.68■■□□□ 1.22
CISHQ9NSE2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CISHQ9NSE2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CISHQ9NSE2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CISHQ9NSE2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CISHQ9NSE2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CISHQ9NSE2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.68■■□□□ 1.22
CISHQ9NSE2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CISHQ9NSE2 KRT87P-202ENST00000534226 1464 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms