Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 AC092053.2-201ENST00000640557 1818 ntBASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 AC127496.7-201ENST00000625110 1798 ntBASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPHK2Q9NRA0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 TERF1P5-201ENST00000477545 1207 ntBASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.8■■□□□ 1.08
SPHK2Q9NRA0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 AC080038.3-201ENST00000623346 1952 ntBASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 AC120498.10-201ENST00000621827 505 ntBASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 AC013268.1-206ENST00000638368 961 ntBASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 AC112229.1-201ENST00000639295 961 ntBASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPHK2Q9NRA0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 TSPY6P-201ENST00000448518 926 ntBASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.78■■□□□ 1.08
SPHK2Q9NRA0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 AC003102.1-202ENST00000563394 1796 ntBASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.77■■□□□ 1.08
SPHK2Q9NRA0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SPHK2Q9NRA0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
SPHK2Q9NRA0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 GUSBP6-202ENST00000438529 1198 ntBASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.76■■□□□ 1.07
SPHK2Q9NRA0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 AC142086.2-201ENST00000569753 217 ntBASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SPHK2Q9NRA0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 AC007322.4-201ENST00000509611 723 ntBASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 AF201337.1-201ENST00000520239 748 ntBASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 AC133552.2-202ENST00000575694 574 ntBASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SPHK2Q9NRA0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms