Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 ESRRAP2-201ENST00000418437 1549 ntBASIC19.94■□□□□ 0.78
KLHL1Q9NR64 OXCT2P1-201ENST00000447263 1535 ntBASIC19.94■□□□□ 0.78
KLHL1Q9NR64 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 TPRG1LP1-201ENST00000598702 760 ntBASIC19.94■□□□□ 0.78
KLHL1Q9NR64 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
KLHL1Q9NR64 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 ECEL1P1-201ENST00000373592 1742 ntBASIC19.93■□□□□ 0.78
KLHL1Q9NR64 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KLHL1Q9NR64 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 AC127496.7-201ENST00000625110 1798 ntBASIC19.92■□□□□ 0.78
KLHL1Q9NR64 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
KLHL1Q9NR64 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHL1Q9NR64 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 AC242852.2-201ENST00000615738 1807 ntBASIC19.9■□□□□ 0.78
KLHL1Q9NR64 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.9■□□□□ 0.78
KLHL1Q9NR64 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KLHL1Q9NR64 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KLHL1Q9NR64 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.89■□□□□ 0.77
KLHL1Q9NR64 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL1Q9NR64 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL1Q9NR64 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms