Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.06■□□□□ 0.8
NEUROD4Q9HD90 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NEUROD4Q9HD90 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 ZNRF2P3-201ENST00000424200 374 ntBASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 AC027682.1-201ENST00000562846 899 ntBASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 SMUG1P1-201ENST00000590640 811 ntBASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
NEUROD4Q9HD90 AC003102.1-202ENST00000563394 1796 ntBASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NEUROD4Q9HD90 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.02■□□□□ 0.8
NEUROD4Q9HD90 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NEUROD4Q9HD90 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
NEUROD4Q9HD90 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
NEUROD4Q9HD90 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20■□□□□ 0.79
NEUROD4Q9HD90 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20■□□□□ 0.79
NEUROD4Q9HD90 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEUROD4Q9HD90 EDA-201ENST00000338901 1233 ntBASIC20■□□□□ 0.79
NEUROD4Q9HD90 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20■□□□□ 0.79
NEUROD4Q9HD90 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20■□□□□ 0.79
NEUROD4Q9HD90 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEUROD4Q9HD90 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEUROD4Q9HD90 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEUROD4Q9HD90 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 MIR5787-201ENST00000611784 55 ntBASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 FEM1AP4-201ENST00000443167 1987 ntBASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms