Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATP13A1Q9HD20 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATP13A1Q9HD20 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.83■■□□□ 1.08
ATP13A1Q9HD20 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATP13A1Q9HD20 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATP13A1Q9HD20 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ATP13A1Q9HD20 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATP13A1Q9HD20 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 KRT87P-202ENST00000534226 1464 ntBASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATP13A1Q9HD20 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 AC004854.2-201ENST00000608450 1441 ntBASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 AC104564.3-201ENST00000582367 638 ntBASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 FAM99A-202ENST00000538190 1989 ntBASIC21.81■■□□□ 1.08
ATP13A1Q9HD20 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 AP004607.4-201ENST00000530158 1459 ntBASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 KRT18P61-201ENST00000585825 1298 ntBASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP13A1Q9HD20 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP13A1Q9HD20 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP13A1Q9HD20 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 AC026471.6-201ENST00000622954 1905 ntBASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP13A1Q9HD20 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms