Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR1BQ9H9Y6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 AC011767.1-201ENST00000617410 1153 ntBASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR1BQ9H9Y6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
POLR1BQ9H9Y6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 AC087239.1-201ENST00000622671 572 ntBASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1BQ9H9Y6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 TMEM191A-211ENST00000637163 1067 ntBASIC20.91■□□□□ 0.94
POLR1BQ9H9Y6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 MIR663A-201ENST00000385250 93 ntBASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 GPX1P1-201ENST00000388829 606 ntBASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1BQ9H9Y6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms