Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG1Q9H6L5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 AC026471.6-201ENST00000622954 1905 ntBASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 AC104187.1-201ENST00000607510 612 ntBASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG1Q9H6L5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 AC008175.2-201ENST00000612840 297 ntBASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 AC010542.4-201ENST00000563151 1910 ntBASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG1Q9H6L5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 AC079834.2-201ENST00000609776 1949 ntBASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 KRT18P11-201ENST00000435214 1283 ntBASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 SLC7A5P1-201ENST00000568957 537 ntBASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 KRT18P61-201ENST00000585825 1298 ntBASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 AP001160.3-201ENST00000601484 763 ntBASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG1Q9H6L5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.7■■□□□ 1.06
RETREG1Q9H6L5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RETREG1Q9H6L5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG1Q9H6L5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms