Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 AC010141.3-201ENST00000456659 717 ntBASIC20.57■□□□□ 0.88
SOX17Q9H6I2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 AC123595.1-201ENST00000440769 1046 ntBASIC20.56■□□□□ 0.88
SOX17Q9H6I2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX17Q9H6I2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L2-201ENST00000561772 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L6-201ENST00000626483 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L1-201ENST00000627662 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L8-201ENST00000629013 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L3-201ENST00000630187 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L7-201ENST00000630678 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 DUX4L5-201ENST00000630834 1275 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 AC005229.4-201ENST00000610085 2198 ntBASIC20.55■□□□□ 0.88
SOX17Q9H6I2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SOX17Q9H6I2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 CCDC92B-201ENST00000575506 885 ntBASIC20.54■□□□□ 0.88
SOX17Q9H6I2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX17Q9H6I2 FAM99A-202ENST00000538190 1989 ntBASIC20.54■□□□□ 0.88
SOX17Q9H6I2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.53■□□□□ 0.88
SOX17Q9H6I2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 LINC02228-203ENST00000641970 1355 ntBASIC20.52■□□□□ 0.88
SOX17Q9H6I2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX17Q9H6I2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 422.7 ms