Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN3Q9H347 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN3Q9H347 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN3Q9H347 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN3Q9H347 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 PKD1P6-201ENST00000343738 4769 ntBASIC19.68■□□□□ 0.74
UBQLN3Q9H347 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
UBQLN3Q9H347 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 AC079089.2-201ENST00000531211 1277 ntBASIC19.67■□□□□ 0.74
UBQLN3Q9H347 KRT18P14-201ENST00000534205 1250 ntBASIC19.67■□□□□ 0.74
UBQLN3Q9H347 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBQLN3Q9H347 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 AC104564.3-201ENST00000582367 638 ntBASIC19.66■□□□□ 0.74
UBQLN3Q9H347 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN3Q9H347 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.65■□□□□ 0.74
UBQLN3Q9H347 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBQLN3Q9H347 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
UBQLN3Q9H347 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN3Q9H347 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 KRT18P5-201ENST00000436075 1291 ntBASIC19.63■□□□□ 0.73
UBQLN3Q9H347 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms