Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC68Q9H2F9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 AC244015.2-201ENST00000616358 1861 ntBASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 AC110285.6-201ENST00000617652 491 ntBASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 AL355001.2-201ENST00000620617 1191 ntBASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC68Q9H2F9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC68Q9H2F9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC68Q9H2F9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 AP001330.3-201ENST00000520123 633 ntBASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 AC133561.4-201ENST00000566112 224 ntBASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC68Q9H2F9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 TSPY26P-201ENST00000476365 1326 ntBASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 AC026471.6-201ENST00000622954 1905 ntBASIC21.21■□□□□ 0.99
CCDC68Q9H2F9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.2■□□□□ 0.99
CCDC68Q9H2F9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 SMUG1P1-201ENST00000590640 811 ntBASIC21.2■□□□□ 0.98
CCDC68Q9H2F9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms