Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTBN4Q9H254 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPTBN4Q9H254 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 EEF1DP3-203ENST00000566025 782 ntBASIC20.64■□□□□ 0.89
SPTBN4Q9H254 MIR6786-201ENST00000616843 113 ntBASIC20.64■□□□□ 0.89
SPTBN4Q9H254 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.64■□□□□ 0.89
SPTBN4Q9H254 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPTBN4Q9H254 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 AC026396.1-201ENST00000419388 421 ntBASIC20.62■□□□□ 0.89
SPTBN4Q9H254 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 AC133681.1-201ENST00000465482 601 ntBASIC20.62■□□□□ 0.89
SPTBN4Q9H254 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.62■□□□□ 0.89
SPTBN4Q9H254 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.61■□□□□ 0.89
SPTBN4Q9H254 KRT17P1-201ENST00000399211 1546 ntBASIC20.61■□□□□ 0.89
SPTBN4Q9H254 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTBN4Q9H254 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 MTDHP1-201ENST00000605323 784 ntBASIC20.59■□□□□ 0.89
SPTBN4Q9H254 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 HLA-B-256ENST00000639848 1089 ntBASIC20.59■□□□□ 0.89
SPTBN4Q9H254 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SPTBN4Q9H254 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
SPTBN4Q9H254 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTBN4Q9H254 KRT18P56-201ENST00000507275 550 ntBASIC20.58■□□□□ 0.89
SPTBN4Q9H254 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms